Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.81■□□□□ 0.6
Trbv15A0A0A6YYE3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv15A0A0A6YYE3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv15A0A0A6YYE3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Trbv15A0A0A6YYE3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv15A0A0A6YYE3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv15A0A0A6YYE3 Gm9397-201ENSMUST00000200125 605 ntBASIC18.78■□□□□ 0.6
Trbv15A0A0A6YYE3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.78■□□□□ 0.6
Trbv15A0A0A6YYE3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv15A0A0A6YYE3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv15A0A0A6YYE3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv15A0A0A6YYE3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv15A0A0A6YYE3 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv15A0A0A6YYE3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.74■□□□□ 0.59
Trbv15A0A0A6YYE3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trbv15A0A0A6YYE3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv15A0A0A6YYE3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv15A0A0A6YYE3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv15A0A0A6YYE3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trbv15A0A0A6YYE3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.71■□□□□ 0.59
Trbv15A0A0A6YYE3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trbv15A0A0A6YYE3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.71■□□□□ 0.59
Trbv15A0A0A6YYE3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trbv15A0A0A6YYE3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trbv15A0A0A6YYE3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv15A0A0A6YYE3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv15A0A0A6YYE3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv15A0A0A6YYE3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trbv15A0A0A6YYE3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv15A0A0A6YYE3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
Trbv15A0A0A6YYE3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv15A0A0A6YYE3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv15A0A0A6YYE3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trbv15A0A0A6YYE3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trbv15A0A0A6YYE3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv15A0A0A6YYE3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv15A0A0A6YYE3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv15A0A0A6YYE3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Trbv15A0A0A6YYE3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv15A0A0A6YYE3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv15A0A0A6YYE3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv15A0A0A6YYE3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Trbv15A0A0A6YYE3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trbv15A0A0A6YYE3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trbv15A0A0A6YYE3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv15A0A0A6YYE3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbv15A0A0A6YYE3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv15A0A0A6YYE3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms