Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav21-dv12A0A075B6C4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav21-dv12A0A075B6C4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav21-dv12A0A075B6C4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Trav21-dv12A0A075B6C4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav21-dv12A0A075B6C4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav21-dv12A0A075B6C4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav21-dv12A0A075B6C4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.19■□□□□ 0.34
Trav21-dv12A0A075B6C4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav21-dv12A0A075B6C4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav21-dv12A0A075B6C4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav21-dv12A0A075B6C4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav21-dv12A0A075B6C4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav21-dv12A0A075B6C4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav21-dv12A0A075B6C4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav21-dv12A0A075B6C4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav21-dv12A0A075B6C4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav21-dv12A0A075B6C4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav21-dv12A0A075B6C4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav21-dv12A0A075B6C4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav21-dv12A0A075B6C4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav21-dv12A0A075B6C4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav21-dv12A0A075B6C4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav21-dv12A0A075B6C4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.15■□□□□ 0.34
Trav21-dv12A0A075B6C4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm4799-201ENSMUST00000095396 657 ntBASIC17.13■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav21-dv12A0A075B6C4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav21-dv12A0A075B6C4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav21-dv12A0A075B6C4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav21-dv12A0A075B6C4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav21-dv12A0A075B6C4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.11■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav21-dv12A0A075B6C4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Trav21-dv12A0A075B6C4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Gm7432-201ENSMUST00000210343 879 ntBASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Trav21-dv12A0A075B6C4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav21-dv12A0A075B6C4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav21-dv12A0A075B6C4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav21-dv12A0A075B6C4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trav21-dv12A0A075B6C4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav21-dv12A0A075B6C4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav21-dv12A0A075B6C4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav21-dv12A0A075B6C4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav21-dv12A0A075B6C4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav21-dv12A0A075B6C4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav21-dv12A0A075B6C4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms