Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav9d-1A0A075B699 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav9d-1A0A075B699 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav9d-1A0A075B699 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9d-1A0A075B699 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav9d-1A0A075B699 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.27■□□□□ 0.36
Trav9d-1A0A075B699 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9d-1A0A075B699 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav9d-1A0A075B699 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav9d-1A0A075B699 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav9d-1A0A075B699 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav9d-1A0A075B699 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav9d-1A0A075B699 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-1A0A075B699 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-1A0A075B699 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav9d-1A0A075B699 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trav9d-1A0A075B699 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav9d-1A0A075B699 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-1A0A075B699 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-1A0A075B699 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-1A0A075B699 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-1A0A075B699 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav9d-1A0A075B699 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav9d-1A0A075B699 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-1A0A075B699 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav9d-1A0A075B699 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-1A0A075B699 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav9d-1A0A075B699 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav9d-1A0A075B699 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav9d-1A0A075B699 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trav9d-1A0A075B699 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Gm8503-201ENSMUST00000118131 455 ntBASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav9d-1A0A075B699 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav9d-1A0A075B699 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Trav9d-1A0A075B699 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav9d-1A0A075B699 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms