Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav4-4-dv10A0A075B651 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav4-4-dv10A0A075B651 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav4-4-dv10A0A075B651 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav4-4-dv10A0A075B651 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav4-4-dv10A0A075B651 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Nkain2-201ENSMUST00000092602 558 ntBASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav4-4-dv10A0A075B651 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.47■□□□□ 0.39
Trav4-4-dv10A0A075B651 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav4-4-dv10A0A075B651 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav4-4-dv10A0A075B651 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav4-4-dv10A0A075B651 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav4-4-dv10A0A075B651 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav4-4-dv10A0A075B651 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav4-4-dv10A0A075B651 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trav4-4-dv10A0A075B651 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav4-4-dv10A0A075B651 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav4-4-dv10A0A075B651 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav4-4-dv10A0A075B651 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms