Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-4A0A075B620 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav7n-4A0A075B620 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav7n-4A0A075B620 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav7n-4A0A075B620 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7n-4A0A075B620 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav7n-4A0A075B620 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav7n-4A0A075B620 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Trav7n-4A0A075B620 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav7n-4A0A075B620 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav7n-4A0A075B620 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav7n-4A0A075B620 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav7n-4A0A075B620 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trav7n-4A0A075B620 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav7n-4A0A075B620 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7n-4A0A075B620 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav7n-4A0A075B620 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav7n-4A0A075B620 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.02■□□□□ 0.31
Trav7n-4A0A075B620 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trav7n-4A0A075B620 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7n-4A0A075B620 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7n-4A0A075B620 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav7n-4A0A075B620 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav7n-4A0A075B620 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav7n-4A0A075B620 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav7n-4A0A075B620 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav7n-4A0A075B620 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7n-4A0A075B620 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7n-4A0A075B620 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav7n-4A0A075B620 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7n-4A0A075B620 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav7n-4A0A075B620 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav7n-4A0A075B620 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav7n-4A0A075B620 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7n-4A0A075B620 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav7n-4A0A075B620 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Trav7n-4A0A075B620 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7n-4A0A075B620 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav7n-4A0A075B620 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav7n-4A0A075B620 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Trav7n-4A0A075B620 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Trav7n-4A0A075B620 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms