Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rtl1Q7M732 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Rtl1Q7M732 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtl1Q7M732 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rtl1Q7M732 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtl1Q7M732 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rtl1Q7M732 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Gm2272-201ENSMUST00000194903 582 ntBASIC27.19■■□□□ 1.94
Rtl1Q7M732 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC27.19■■□□□ 1.94
Rtl1Q7M732 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rtl1Q7M732 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rtl1Q7M732 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC27.17■■□□□ 1.94
Rtl1Q7M732 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC27.17■■□□□ 1.94
Rtl1Q7M732 CT010506.4-201ENSMUST00000225457 351 ntBASIC27.17■■□□□ 1.94
Rtl1Q7M732 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Gm9867-201ENSMUST00000192212 2647 ntBASIC27.17■■□□□ 1.94
Rtl1Q7M732 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC27.17■■□□□ 1.94
Rtl1Q7M732 Gm14026-201ENSMUST00000120625 1789 ntBASIC27.17■■□□□ 1.94
Rtl1Q7M732 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rtl1Q7M732 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 AC154767.3-201ENSMUST00000225150 1342 ntBASIC27.16■■□□□ 1.94
Rtl1Q7M732 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Auts2-212ENSMUST00000178555 309 ntBASIC27.16■■□□□ 1.94
Rtl1Q7M732 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rtl1Q7M732 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 AC131710.1-201ENSMUST00000228336 990 ntBASIC27.15■■□□□ 1.94
Rtl1Q7M732 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rtl1Q7M732 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Gm6973-201ENSMUST00000117080 721 ntBASIC27.14■■□□□ 1.94
Rtl1Q7M732 Gm13365-201ENSMUST00000121188 973 ntBASIC27.14■■□□□ 1.94
Rtl1Q7M732 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rtl1Q7M732 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rtl1Q7M732 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Rtl1Q7M732 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rtl1Q7M732 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtl1Q7M732 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtl1Q7M732 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Rtl1Q7M732 Gm6018-201ENSMUST00000216090 1306 ntBASIC27.13■■□□□ 1.93
Rtl1Q7M732 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rtl1Q7M732 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC27.13■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms