Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ube4bQ9ES00 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4bQ9ES00 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4bQ9ES00 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ube4bQ9ES00 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ube4bQ9ES00 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ube4bQ9ES00 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ube4bQ9ES00 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ube4bQ9ES00 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ube4bQ9ES00 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ube4bQ9ES00 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube4bQ9ES00 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube4bQ9ES00 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube4bQ9ES00 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ube4bQ9ES00 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube4bQ9ES00 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ube4bQ9ES00 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Ube4bQ9ES00 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube4bQ9ES00 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube4bQ9ES00 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube4bQ9ES00 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube4bQ9ES00 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ube4bQ9ES00 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube4bQ9ES00 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Ube4bQ9ES00 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ube4bQ9ES00 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ube4bQ9ES00 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.64■■□□□ 1.06
Ube4bQ9ES00 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ube4bQ9ES00 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ube4bQ9ES00 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ube4bQ9ES00 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Ube4bQ9ES00 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ube4bQ9ES00 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ube4bQ9ES00 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube4bQ9ES00 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ube4bQ9ES00 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ube4bQ9ES00 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Ube4bQ9ES00 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ube4bQ9ES00 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube4bQ9ES00 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube4bQ9ES00 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ube4bQ9ES00 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube4bQ9ES00 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube4bQ9ES00 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube4bQ9ES00 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ube4bQ9ES00 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ube4bQ9ES00 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.58■■□□□ 1.04
Ube4bQ9ES00 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ube4bQ9ES00 Notumos-201ENSMUST00000151998 2659 ntBASIC21.58■■□□□ 1.04
Ube4bQ9ES00 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ube4bQ9ES00 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube4bQ9ES00 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube4bQ9ES00 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ube4bQ9ES00 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube4bQ9ES00 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms