Protein–RNA interactions for Protein: Q9CQD4

Chmp1b2, Charged multivesicular body protein 1b-2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b2Q9CQD4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1b2Q9CQD4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1b2Q9CQD4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1b2Q9CQD4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b2Q9CQD4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1b2Q9CQD4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Chmp1b2Q9CQD4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1b2Q9CQD4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b2Q9CQD4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.62■□□□□ 0.89
Chmp1b2Q9CQD4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b2Q9CQD4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b2Q9CQD4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1b2Q9CQD4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp1b2Q9CQD4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.61■□□□□ 0.89
Chmp1b2Q9CQD4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp1b2Q9CQD4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Chmp1b2Q9CQD4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp1b2Q9CQD4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp1b2Q9CQD4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.58■□□□□ 0.89
Chmp1b2Q9CQD4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp1b2Q9CQD4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chmp1b2Q9CQD4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Chmp1b2Q9CQD4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b2Q9CQD4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b2Q9CQD4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b2Q9CQD4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chmp1b2Q9CQD4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Chmp1b2Q9CQD4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp1b2Q9CQD4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp1b2Q9CQD4 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.55■□□□□ 0.88
Chmp1b2Q9CQD4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chmp1b2Q9CQD4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp1b2Q9CQD4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp1b2Q9CQD4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp1b2Q9CQD4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.52■□□□□ 0.87
Chmp1b2Q9CQD4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp1b2Q9CQD4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp1b2Q9CQD4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.51■□□□□ 0.87
Chmp1b2Q9CQD4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp1b2Q9CQD4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp1b2Q9CQD4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp1b2Q9CQD4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp1b2Q9CQD4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.5■□□□□ 0.87
Chmp1b2Q9CQD4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp1b2Q9CQD4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms