Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga4Q91XY4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga4Q91XY4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhga4Q91XY4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhga4Q91XY4 Gm45364-201ENSMUST00000210883 159 ntBASIC22.1■■□□□ 1.13
Pcdhga4Q91XY4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Gm9812-201ENSMUST00000061934 968 ntBASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhga4Q91XY4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhga4Q91XY4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhga4Q91XY4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga4Q91XY4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Pcdhga4Q91XY4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga4Q91XY4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga4Q91XY4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhga4Q91XY4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Gm9806-201ENSMUST00000051080 552 ntBASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdhga4Q91XY4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga4Q91XY4 Gm11175-201ENSMUST00000116172 543 ntBASIC22.05■■□□□ 1.12
Pcdhga4Q91XY4 Gm11687-201ENSMUST00000118911 886 ntBASIC22.05■■□□□ 1.12
Pcdhga4Q91XY4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga4Q91XY4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhga4Q91XY4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Pcdhga4Q91XY4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga4Q91XY4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Pcdhga4Q91XY4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga4Q91XY4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdhga4Q91XY4 Scarna2-201ENSMUST00000157560 414 ntBASIC22.03■■□□□ 1.12
Pcdhga4Q91XY4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.03■■□□□ 1.12
Pcdhga4Q91XY4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga4Q91XY4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdhga4Q91XY4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.02■■□□□ 1.12
Pcdhga4Q91XY4 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.02■■□□□ 1.12
Pcdhga4Q91XY4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdhga4Q91XY4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga4Q91XY4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga4Q91XY4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga4Q91XY4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Pcdhga4Q91XY4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdhga4Q91XY4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga4Q91XY4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Pcdhga4Q91XY4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga4Q91XY4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdhga4Q91XY4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdhga4Q91XY4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga4Q91XY4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.96■■□□□ 1.11
Pcdhga4Q91XY4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pcdhga4Q91XY4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.96■■□□□ 1.11
Pcdhga4Q91XY4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhga4Q91XY4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhga4Q91XY4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhga4Q91XY4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Pcdhga4Q91XY4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhga4Q91XY4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga4Q91XY4 Gm16437-201ENSMUST00000025669 507 ntBASIC21.93■■□□□ 1.1
Pcdhga4Q91XY4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhga4Q91XY4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga4Q91XY4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga4Q91XY4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhga4Q91XY4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms