Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkd2Q8VE28 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkd2Q8VE28 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.54■□□□□ 0.88
Nkd2Q8VE28 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkd2Q8VE28 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkd2Q8VE28 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Gm11687-201ENSMUST00000118911 886 ntBASIC20.53■□□□□ 0.88
Nkd2Q8VE28 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.53■□□□□ 0.88
Nkd2Q8VE28 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.53■□□□□ 0.88
Nkd2Q8VE28 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkd2Q8VE28 Gm9806-201ENSMUST00000051080 552 ntBASIC20.52■□□□□ 0.88
Nkd2Q8VE28 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Nkd2Q8VE28 Scarna2-201ENSMUST00000157560 414 ntBASIC20.51■□□□□ 0.87
Nkd2Q8VE28 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nkd2Q8VE28 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkd2Q8VE28 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkd2Q8VE28 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkd2Q8VE28 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkd2Q8VE28 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Nkd2Q8VE28 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkd2Q8VE28 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkd2Q8VE28 Gm4799-201ENSMUST00000095396 657 ntBASIC20.49■□□□□ 0.87
Nkd2Q8VE28 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkd2Q8VE28 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkd2Q8VE28 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nkd2Q8VE28 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nkd2Q8VE28 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkd2Q8VE28 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.48■□□□□ 0.87
Nkd2Q8VE28 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nkd2Q8VE28 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Nkd2Q8VE28 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkd2Q8VE28 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.47■□□□□ 0.87
Nkd2Q8VE28 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nkd2Q8VE28 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.46■□□□□ 0.87
Nkd2Q8VE28 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.46■□□□□ 0.87
Nkd2Q8VE28 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Mir3960-201ENSMUST00000198213 73 ntBASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd2Q8VE28 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd2Q8VE28 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd2Q8VE28 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd2Q8VE28 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd2Q8VE28 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkd2Q8VE28 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nkd2Q8VE28 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd2Q8VE28 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd2Q8VE28 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd2Q8VE28 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Gm12366-201ENSMUST00000121722 873 ntBASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Gm5786-201ENSMUST00000085368 882 ntBASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd2Q8VE28 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Gm16437-201ENSMUST00000025669 507 ntBASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd2Q8VE28 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkd2Q8VE28 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd2Q8VE28 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd2Q8VE28 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd2Q8VE28 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd2Q8VE28 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd2Q8VE28 Gm37136-201ENSMUST00000194368 194 ntBASIC20.38■□□□□ 0.85
Nkd2Q8VE28 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd2Q8VE28 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd2Q8VE28 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.38■□□□□ 0.85
Nkd2Q8VE28 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd2Q8VE28 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd2Q8VE28 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms