Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Lrrc42Q8R2U7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.63■■□□□ 1.37
Lrrc42Q8R2U7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Lrrc42Q8R2U7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Lrrc42Q8R2U7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Lrrc42Q8R2U7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Lrrc42Q8R2U7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Lrrc42Q8R2U7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Lrrc42Q8R2U7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Lrrc42Q8R2U7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrrc42Q8R2U7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrrc42Q8R2U7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.59■■□□□ 1.37
Lrrc42Q8R2U7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Lrrc42Q8R2U7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Lrrc42Q8R2U7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lrrc42Q8R2U7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Lrrc42Q8R2U7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Lrrc42Q8R2U7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lrrc42Q8R2U7 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.57■■□□□ 1.36
Lrrc42Q8R2U7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Lrrc42Q8R2U7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Lrrc42Q8R2U7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Lrrc42Q8R2U7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Lrrc42Q8R2U7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Lrrc42Q8R2U7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.55■■□□□ 1.36
Lrrc42Q8R2U7 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.55■■□□□ 1.36
Lrrc42Q8R2U7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lrrc42Q8R2U7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Lrrc42Q8R2U7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lrrc42Q8R2U7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Lrrc42Q8R2U7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.53■■□□□ 1.36
Lrrc42Q8R2U7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Lrrc42Q8R2U7 Gm37136-201ENSMUST00000194368 194 ntBASIC23.52■■□□□ 1.36
Lrrc42Q8R2U7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Lrrc42Q8R2U7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Lrrc42Q8R2U7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Lrrc42Q8R2U7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lrrc42Q8R2U7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lrrc42Q8R2U7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Lrrc42Q8R2U7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lrrc42Q8R2U7 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.49■■□□□ 1.35
Lrrc42Q8R2U7 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.49■■□□□ 1.35
Lrrc42Q8R2U7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Lrrc42Q8R2U7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Lrrc42Q8R2U7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Lrrc42Q8R2U7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Lrrc42Q8R2U7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lrrc42Q8R2U7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.46■■□□□ 1.35
Lrrc42Q8R2U7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.46■■□□□ 1.35
Lrrc42Q8R2U7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Lrrc42Q8R2U7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Lrrc42Q8R2U7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Lrrc42Q8R2U7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lrrc42Q8R2U7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lrrc42Q8R2U7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lrrc42Q8R2U7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lrrc42Q8R2U7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lrrc42Q8R2U7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Lrrc42Q8R2U7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.44■■□□□ 1.34
Lrrc42Q8R2U7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lrrc42Q8R2U7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lrrc42Q8R2U7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lrrc42Q8R2U7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Lrrc42Q8R2U7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lrrc42Q8R2U7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Lrrc42Q8R2U7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrc42Q8R2U7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrc42Q8R2U7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrc42Q8R2U7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Lrrc42Q8R2U7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
Lrrc42Q8R2U7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lrrc42Q8R2U7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.39■■□□□ 1.33
Lrrc42Q8R2U7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Lrrc42Q8R2U7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lrrc42Q8R2U7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms