Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Shtn1Q8K2Q9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shtn1Q8K2Q9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Shtn1Q8K2Q9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.18■■□□□ 1.94
Shtn1Q8K2Q9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Shtn1Q8K2Q9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Shtn1Q8K2Q9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shtn1Q8K2Q9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Shtn1Q8K2Q9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.17■■□□□ 1.94
Shtn1Q8K2Q9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Shtn1Q8K2Q9 Gm15820-201ENSMUST00000201566 728 ntBASIC27.16■■□□□ 1.94
Shtn1Q8K2Q9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Shtn1Q8K2Q9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.15■■□□□ 1.94
Shtn1Q8K2Q9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.15■■□□□ 1.94
Shtn1Q8K2Q9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
Shtn1Q8K2Q9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Shtn1Q8K2Q9 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.14■■□□□ 1.94
Shtn1Q8K2Q9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shtn1Q8K2Q9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Shtn1Q8K2Q9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Shtn1Q8K2Q9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.12■■□□□ 1.93
Shtn1Q8K2Q9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shtn1Q8K2Q9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Shtn1Q8K2Q9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shtn1Q8K2Q9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.11■■□□□ 1.93
Shtn1Q8K2Q9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
Shtn1Q8K2Q9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Shtn1Q8K2Q9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Shtn1Q8K2Q9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Shtn1Q8K2Q9 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.1■■□□□ 1.93
Shtn1Q8K2Q9 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.1■■□□□ 1.93
Shtn1Q8K2Q9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
Shtn1Q8K2Q9 Rps24-207ENSMUST00000224568 714 ntBASIC27.09■■□□□ 1.93
Shtn1Q8K2Q9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Shtn1Q8K2Q9 Gm44428-201ENSMUST00000204474 874 ntBASIC27.08■■□□□ 1.93
Shtn1Q8K2Q9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Shtn1Q8K2Q9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shtn1Q8K2Q9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Shtn1Q8K2Q9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Shtn1Q8K2Q9 Nsd1-203ENSMUST00000224156 1149 ntBASIC27.06■■□□□ 1.92
Shtn1Q8K2Q9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Shtn1Q8K2Q9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shtn1Q8K2Q9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Shtn1Q8K2Q9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Shtn1Q8K2Q9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Shtn1Q8K2Q9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
Shtn1Q8K2Q9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Shtn1Q8K2Q9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
Shtn1Q8K2Q9 Gm14117-201ENSMUST00000122417 843 ntBASIC27.03■■□□□ 1.92
Shtn1Q8K2Q9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Shtn1Q8K2Q9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.02■■□□□ 1.92
Shtn1Q8K2Q9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
Shtn1Q8K2Q9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Gm43566-201ENSMUST00000196851 808 ntBASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Shtn1Q8K2Q9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
Shtn1Q8K2Q9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC27■■□□□ 1.91
Shtn1Q8K2Q9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shtn1Q8K2Q9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shtn1Q8K2Q9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Shtn1Q8K2Q9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.99■■□□□ 1.91
Shtn1Q8K2Q9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
Shtn1Q8K2Q9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.99■■□□□ 1.91
Shtn1Q8K2Q9 Gm45102-201ENSMUST00000207427 857 ntBASIC26.98■■□□□ 1.91
Shtn1Q8K2Q9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Shtn1Q8K2Q9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Shtn1Q8K2Q9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shtn1Q8K2Q9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Shtn1Q8K2Q9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.97■■□□□ 1.91
Shtn1Q8K2Q9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
Shtn1Q8K2Q9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.96■■□□□ 1.91
Shtn1Q8K2Q9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Shtn1Q8K2Q9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Shtn1Q8K2Q9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Shtn1Q8K2Q9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Shtn1Q8K2Q9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shtn1Q8K2Q9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Shtn1Q8K2Q9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Shtn1Q8K2Q9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.92■■□□□ 1.9
Shtn1Q8K2Q9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.92■■□□□ 1.9
Shtn1Q8K2Q9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Shtn1Q8K2Q9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.91■■□□□ 1.9
Shtn1Q8K2Q9 Gm45444-201ENSMUST00000211394 898 ntBASIC26.91■■□□□ 1.9
Shtn1Q8K2Q9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Shtn1Q8K2Q9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Shtn1Q8K2Q9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shtn1Q8K2Q9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Shtn1Q8K2Q9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Shtn1Q8K2Q9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms