Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ppp1r3eQ8BRJ4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Ppp1r3eQ8BRJ4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3eQ8BRJ4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3eQ8BRJ4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ppp1r3eQ8BRJ4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ppp1r3eQ8BRJ4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ppp1r3eQ8BRJ4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ppp1r3eQ8BRJ4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ppp1r3eQ8BRJ4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ppp1r3eQ8BRJ4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ppp1r3eQ8BRJ4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ppp1r3eQ8BRJ4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ppp1r3eQ8BRJ4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ppp1r3eQ8BRJ4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ppp1r3eQ8BRJ4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.39■■□□□ 1.02
Ppp1r3eQ8BRJ4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ppp1r3eQ8BRJ4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ppp1r3eQ8BRJ4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ppp1r3eQ8BRJ4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp1r3eQ8BRJ4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ppp1r3eQ8BRJ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ppp1r3eQ8BRJ4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.36■■□□□ 1.01
Ppp1r3eQ8BRJ4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp1r3eQ8BRJ4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.36■■□□□ 1.01
Ppp1r3eQ8BRJ4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ppp1r3eQ8BRJ4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ppp1r3eQ8BRJ4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ppp1r3eQ8BRJ4 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp1r3eQ8BRJ4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp1r3eQ8BRJ4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp1r3eQ8BRJ4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.34■■□□□ 1.01
Ppp1r3eQ8BRJ4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ppp1r3eQ8BRJ4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp1r3eQ8BRJ4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp1r3eQ8BRJ4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp1r3eQ8BRJ4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp1r3eQ8BRJ4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ppp1r3eQ8BRJ4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ppp1r3eQ8BRJ4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ppp1r3eQ8BRJ4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp1r3eQ8BRJ4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ppp1r3eQ8BRJ4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3eQ8BRJ4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ppp1r3eQ8BRJ4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.31■■□□□ 1
Ppp1r3eQ8BRJ4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3eQ8BRJ4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3eQ8BRJ4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3eQ8BRJ4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ppp1r3eQ8BRJ4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3eQ8BRJ4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3eQ8BRJ4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3eQ8BRJ4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3eQ8BRJ4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3eQ8BRJ4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp1r3eQ8BRJ4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.27■□□□□ 0.99
Ppp1r3eQ8BRJ4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3eQ8BRJ4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ppp1r3eQ8BRJ4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3eQ8BRJ4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ppp1r3eQ8BRJ4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ppp1r3eQ8BRJ4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ppp1r3eQ8BRJ4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp1r3eQ8BRJ4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp1r3eQ8BRJ4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp1r3eQ8BRJ4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ppp1r3eQ8BRJ4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.23■□□□□ 0.99
Ppp1r3eQ8BRJ4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ppp1r3eQ8BRJ4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms