Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn3bQ8BHK2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn3bQ8BHK2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn3bQ8BHK2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn3bQ8BHK2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn3bQ8BHK2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn3bQ8BHK2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn3bQ8BHK2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn3bQ8BHK2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn3bQ8BHK2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn3bQ8BHK2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn3bQ8BHK2 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.08■□□□□ 0.97
Scn3bQ8BHK2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn3bQ8BHK2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
Scn3bQ8BHK2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn3bQ8BHK2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn3bQ8BHK2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn3bQ8BHK2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn3bQ8BHK2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn3bQ8BHK2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Scn3bQ8BHK2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn3bQ8BHK2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn3bQ8BHK2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn3bQ8BHK2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn3bQ8BHK2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn3bQ8BHK2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Scn3bQ8BHK2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn3bQ8BHK2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Scn3bQ8BHK2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.03■□□□□ 0.96
Scn3bQ8BHK2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn3bQ8BHK2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
Scn3bQ8BHK2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn3bQ8BHK2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn3bQ8BHK2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scn3bQ8BHK2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Scn3bQ8BHK2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn3bQ8BHK2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.01■□□□□ 0.95
Scn3bQ8BHK2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scn3bQ8BHK2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21■□□□□ 0.95
Scn3bQ8BHK2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21■□□□□ 0.95
Scn3bQ8BHK2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn3bQ8BHK2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn3bQ8BHK2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn3bQ8BHK2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn3bQ8BHK2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Scn3bQ8BHK2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn3bQ8BHK2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn3bQ8BHK2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn3bQ8BHK2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn3bQ8BHK2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Scn3bQ8BHK2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms