Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atpaf1Q811I0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atpaf1Q811I0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atpaf1Q811I0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atpaf1Q811I0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Atpaf1Q811I0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atpaf1Q811I0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atpaf1Q811I0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atpaf1Q811I0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atpaf1Q811I0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atpaf1Q811I0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atpaf1Q811I0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Atpaf1Q811I0 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.6■□□□□ 0.57
Atpaf1Q811I0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atpaf1Q811I0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Atpaf1Q811I0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atpaf1Q811I0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atpaf1Q811I0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atpaf1Q811I0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Atpaf1Q811I0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atpaf1Q811I0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atpaf1Q811I0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atpaf1Q811I0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atpaf1Q811I0 Particl-201ENSMUST00000205370 1560 ntBASIC18.57■□□□□ 0.56
Atpaf1Q811I0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atpaf1Q811I0 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.57■□□□□ 0.56
Atpaf1Q811I0 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.57■□□□□ 0.56
Atpaf1Q811I0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atpaf1Q811I0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atpaf1Q811I0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Atpaf1Q811I0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atpaf1Q811I0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atpaf1Q811I0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atpaf1Q811I0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atpaf1Q811I0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atpaf1Q811I0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Atpaf1Q811I0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Atpaf1Q811I0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atpaf1Q811I0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atpaf1Q811I0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.52■□□□□ 0.56
Atpaf1Q811I0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.52■□□□□ 0.56
Atpaf1Q811I0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.52■□□□□ 0.56
Atpaf1Q811I0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Atpaf1Q811I0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atpaf1Q811I0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Atpaf1Q811I0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atpaf1Q811I0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atpaf1Q811I0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atpaf1Q811I0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atpaf1Q811I0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atpaf1Q811I0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atpaf1Q811I0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.46■□□□□ 0.55
Atpaf1Q811I0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atpaf1Q811I0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atpaf1Q811I0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atpaf1Q811I0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Atpaf1Q811I0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atpaf1Q811I0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atpaf1Q811I0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Atpaf1Q811I0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atpaf1Q811I0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Atpaf1Q811I0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms