Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Skida1Q80YR3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Skida1Q80YR3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Skida1Q80YR3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC21.97■■□□□ 1.11
Skida1Q80YR3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Skida1Q80YR3 Gm14523-201ENSMUST00000117260 558 ntBASIC21.96■■□□□ 1.11
Skida1Q80YR3 AC153937.1-201ENSMUST00000218734 412 ntBASIC21.96■■□□□ 1.11
Skida1Q80YR3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Skida1Q80YR3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Skida1Q80YR3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.95■■□□□ 1.1
Skida1Q80YR3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Skida1Q80YR3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Skida1Q80YR3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.94■■□□□ 1.1
Skida1Q80YR3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Skida1Q80YR3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Skida1Q80YR3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Skida1Q80YR3 Gm37136-201ENSMUST00000194368 194 ntBASIC21.93■■□□□ 1.1
Skida1Q80YR3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.93■■□□□ 1.1
Skida1Q80YR3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Skida1Q80YR3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Skida1Q80YR3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Skida1Q80YR3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Skida1Q80YR3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.92■■□□□ 1.1
Skida1Q80YR3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Skida1Q80YR3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Skida1Q80YR3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Skida1Q80YR3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.91■■□□□ 1.1
Skida1Q80YR3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.91■■□□□ 1.1
Skida1Q80YR3 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Skida1Q80YR3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
Skida1Q80YR3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Skida1Q80YR3 Gm43017-201ENSMUST00000198296 752 ntBASIC21.9■■□□□ 1.1
Skida1Q80YR3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC21.9■■□□□ 1.1
Skida1Q80YR3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Skida1Q80YR3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Skida1Q80YR3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Skida1Q80YR3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Skida1Q80YR3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Skida1Q80YR3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Skida1Q80YR3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Skida1Q80YR3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Skida1Q80YR3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Skida1Q80YR3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Skida1Q80YR3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Skida1Q80YR3 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.86■■□□□ 1.09
Skida1Q80YR3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.86■■□□□ 1.09
Skida1Q80YR3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Skida1Q80YR3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Skida1Q80YR3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.86■■□□□ 1.09
Skida1Q80YR3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Skida1Q80YR3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.85■■□□□ 1.09
Skida1Q80YR3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.84■■□□□ 1.09
Skida1Q80YR3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Skida1Q80YR3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Skida1Q80YR3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Skida1Q80YR3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Skida1Q80YR3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Skida1Q80YR3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Skida1Q80YR3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Skida1Q80YR3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Skida1Q80YR3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Skida1Q80YR3 Gm5812-201ENSMUST00000061073 957 ntBASIC21.82■■□□□ 1.08
Skida1Q80YR3 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.82■■□□□ 1.08
Skida1Q80YR3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Skida1Q80YR3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Skida1Q80YR3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Skida1Q80YR3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Skida1Q80YR3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.8■■□□□ 1.08
Skida1Q80YR3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Skida1Q80YR3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Skida1Q80YR3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Skida1Q80YR3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Skida1Q80YR3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Skida1Q80YR3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Skida1Q80YR3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Skida1Q80YR3 Gm44882-201ENSMUST00000205702 802 ntBASIC21.78■■□□□ 1.08
Skida1Q80YR3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.78■■□□□ 1.08
Skida1Q80YR3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Skida1Q80YR3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.77■■□□□ 1.08
Skida1Q80YR3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Skida1Q80YR3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Skida1Q80YR3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.76■■□□□ 1.07
Skida1Q80YR3 Gm28196-201ENSMUST00000187719 640 ntBASIC21.76■■□□□ 1.07
Skida1Q80YR3 Gpr146-202ENSMUST00000053120 1040 ntBASIC21.76■■□□□ 1.07
Skida1Q80YR3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Skida1Q80YR3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Skida1Q80YR3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Skida1Q80YR3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms