Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rfx4Q7TNK1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
Rfx4Q7TNK1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rfx4Q7TNK1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rfx4Q7TNK1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rfx4Q7TNK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rfx4Q7TNK1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.75■■□□□ 1.07
Rfx4Q7TNK1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Rfx4Q7TNK1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rfx4Q7TNK1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rfx4Q7TNK1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rfx4Q7TNK1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Rfx4Q7TNK1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfx4Q7TNK1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfx4Q7TNK1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rfx4Q7TNK1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfx4Q7TNK1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfx4Q7TNK1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfx4Q7TNK1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfx4Q7TNK1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Rfx4Q7TNK1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rfx4Q7TNK1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms