Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube1Q6NZL8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scube1Q6NZL8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scube1Q6NZL8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scube1Q6NZL8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scube1Q6NZL8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scube1Q6NZL8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scube1Q6NZL8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scube1Q6NZL8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scube1Q6NZL8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.76■■□□□ 1.07
Scube1Q6NZL8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube1Q6NZL8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.76■■□□□ 1.07
Scube1Q6NZL8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scube1Q6NZL8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scube1Q6NZL8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scube1Q6NZL8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.74■■□□□ 1.07
Scube1Q6NZL8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Scube1Q6NZL8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
Scube1Q6NZL8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scube1Q6NZL8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.72■■□□□ 1.07
Scube1Q6NZL8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scube1Q6NZL8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scube1Q6NZL8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Scube1Q6NZL8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scube1Q6NZL8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Scube1Q6NZL8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scube1Q6NZL8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.69■■□□□ 1.06
Scube1Q6NZL8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Scube1Q6NZL8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Scube1Q6NZL8 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.68■■□□□ 1.06
Scube1Q6NZL8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube1Q6NZL8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube1Q6NZL8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Scube1Q6NZL8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Scube1Q6NZL8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scube1Q6NZL8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.66■■□□□ 1.06
Scube1Q6NZL8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Scube1Q6NZL8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scube1Q6NZL8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scube1Q6NZL8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Scube1Q6NZL8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube1Q6NZL8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scube1Q6NZL8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Scube1Q6NZL8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Scube1Q6NZL8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube1Q6NZL8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scube1Q6NZL8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube1Q6NZL8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scube1Q6NZL8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.64■■□□□ 1.05
Scube1Q6NZL8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scube1Q6NZL8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scube1Q6NZL8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scube1Q6NZL8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Scube1Q6NZL8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube1Q6NZL8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Scube1Q6NZL8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Scube1Q6NZL8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.62■■□□□ 1.05
Scube1Q6NZL8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.61■■□□□ 1.05
Scube1Q6NZL8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Scube1Q6NZL8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scube1Q6NZL8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scube1Q6NZL8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scube1Q6NZL8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Scube1Q6NZL8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms