Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VcanQ62059 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VcanQ62059 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
VcanQ62059 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VcanQ62059 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
VcanQ62059 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VcanQ62059 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VcanQ62059 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.09■■□□□ 1.13
VcanQ62059 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VcanQ62059 Etf1-202ENSMUST00000180351 108 ntBASIC22.08■■□□□ 1.13
VcanQ62059 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VcanQ62059 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.08■■□□□ 1.13
VcanQ62059 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VcanQ62059 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
VcanQ62059 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VcanQ62059 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.07■■□□□ 1.12
VcanQ62059 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VcanQ62059 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VcanQ62059 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
VcanQ62059 Gm21956-201ENSMUST00000179946 522 ntBASIC22.06■■□□□ 1.12
VcanQ62059 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VcanQ62059 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.04■■□□□ 1.12
VcanQ62059 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.04■■□□□ 1.12
VcanQ62059 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
VcanQ62059 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
VcanQ62059 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.04■■□□□ 1.12
VcanQ62059 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VcanQ62059 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VcanQ62059 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VcanQ62059 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.03■■□□□ 1.12
VcanQ62059 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.02■■□□□ 1.12
VcanQ62059 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VcanQ62059 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.02■■□□□ 1.12
VcanQ62059 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
VcanQ62059 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
VcanQ62059 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.01■■□□□ 1.11
VcanQ62059 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VcanQ62059 Gm37136-201ENSMUST00000194368 194 ntBASIC22■■□□□ 1.11
VcanQ62059 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VcanQ62059 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.99■■□□□ 1.11
VcanQ62059 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
VcanQ62059 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
VcanQ62059 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.98■■□□□ 1.11
VcanQ62059 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.98■■□□□ 1.11
VcanQ62059 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VcanQ62059 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
VcanQ62059 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
VcanQ62059 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.97■■□□□ 1.11
VcanQ62059 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
VcanQ62059 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.97■■□□□ 1.11
VcanQ62059 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VcanQ62059 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VcanQ62059 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.96■■□□□ 1.11
VcanQ62059 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.96■■□□□ 1.11
VcanQ62059 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VcanQ62059 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
VcanQ62059 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.95■■□□□ 1.1
VcanQ62059 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.95■■□□□ 1.1
VcanQ62059 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VcanQ62059 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VcanQ62059 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
VcanQ62059 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VcanQ62059 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VcanQ62059 Gm13241-201ENSMUST00000094493 780 ntBASIC21.95■■□□□ 1.1
VcanQ62059 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VcanQ62059 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VcanQ62059 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VcanQ62059 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
VcanQ62059 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VcanQ62059 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VcanQ62059 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VcanQ62059 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VcanQ62059 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
VcanQ62059 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
VcanQ62059 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.89■■□□□ 1.09
VcanQ62059 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
VcanQ62059 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.89■■□□□ 1.09
VcanQ62059 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VcanQ62059 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.88■■□□□ 1.09
VcanQ62059 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.88■■□□□ 1.09
VcanQ62059 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VcanQ62059 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VcanQ62059 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VcanQ62059 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.87■■□□□ 1.09
VcanQ62059 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VcanQ62059 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VcanQ62059 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VcanQ62059 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VcanQ62059 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
VcanQ62059 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms