Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox17Q61473 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox17Q61473 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox17Q61473 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox17Q61473 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox17Q61473 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.36■■□□□ 1.01
Sox17Q61473 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.36■■□□□ 1.01
Sox17Q61473 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sox17Q61473 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox17Q61473 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sox17Q61473 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox17Q61473 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox17Q61473 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox17Q61473 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox17Q61473 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox17Q61473 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.33■■□□□ 1.01
Sox17Q61473 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox17Q61473 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Sox17Q61473 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox17Q61473 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Sox17Q61473 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sox17Q61473 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.33■■□□□ 1
Sox17Q61473 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.32■■□□□ 1
Sox17Q61473 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sox17Q61473 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sox17Q61473 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox17Q61473 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox17Q61473 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.31■■□□□ 1
Sox17Q61473 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Sox17Q61473 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox17Q61473 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox17Q61473 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Sox17Q61473 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sox17Q61473 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sox17Q61473 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sox17Q61473 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
Sox17Q61473 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Sox17Q61473 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox17Q61473 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sox17Q61473 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sox17Q61473 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox17Q61473 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox17Q61473 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox17Q61473 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox17Q61473 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.26■□□□□ 0.99
Sox17Q61473 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Sox17Q61473 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sox17Q61473 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox17Q61473 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox17Q61473 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox17Q61473 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.24■□□□□ 0.99
Sox17Q61473 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.24■□□□□ 0.99
Sox17Q61473 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox17Q61473 Zfp131-205ENSMUST00000223812 663 ntBASIC21.23■□□□□ 0.99
Sox17Q61473 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sox17Q61473 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox17Q61473 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox17Q61473 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox17Q61473 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox17Q61473 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.2■□□□□ 0.98
Sox17Q61473 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox17Q61473 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox17Q61473 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox17Q61473 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox17Q61473 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sox17Q61473 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.18■□□□□ 0.98
Sox17Q61473 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox17Q61473 Gm9397-201ENSMUST00000200125 605 ntBASIC21.18■□□□□ 0.98
Sox17Q61473 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox17Q61473 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Sox17Q61473 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox17Q61473 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox17Q61473 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox17Q61473 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox17Q61473 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sox17Q61473 Gm24970-201ENSMUST00000175582 82 ntBASIC21.17■□□□□ 0.98
Sox17Q61473 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.17■□□□□ 0.98
Sox17Q61473 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox17Q61473 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox17Q61473 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox17Q61473 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox17Q61473 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms