Protein–RNA interactions for Protein: Q3ULM0

Ccdc106, Coiled-coil domain-containing protein 106, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc106Q3ULM0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc106Q3ULM0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc106Q3ULM0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc106Q3ULM0 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.71■□□□□ 0.91
Ccdc106Q3ULM0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc106Q3ULM0 Cap2-205ENSMUST00000225824 1634 ntBASIC20.71■□□□□ 0.91
Ccdc106Q3ULM0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Gm11687-201ENSMUST00000118911 886 ntBASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Mir3960-201ENSMUST00000198213 73 ntBASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc106Q3ULM0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Gm9806-201ENSMUST00000051080 552 ntBASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc106Q3ULM0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Gm16437-201ENSMUST00000025669 507 ntBASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc106Q3ULM0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Ccdc106Q3ULM0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc106Q3ULM0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc106Q3ULM0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc106Q3ULM0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc106Q3ULM0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc106Q3ULM0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc106Q3ULM0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc106Q3ULM0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc106Q3ULM0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc106Q3ULM0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.64■□□□□ 0.89
Ccdc106Q3ULM0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc106Q3ULM0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc106Q3ULM0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 Gm45364-201ENSMUST00000210883 159 ntBASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc106Q3ULM0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc106Q3ULM0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc106Q3ULM0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc106Q3ULM0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc106Q3ULM0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc106Q3ULM0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc106Q3ULM0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc106Q3ULM0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc106Q3ULM0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc106Q3ULM0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc106Q3ULM0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc106Q3ULM0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc106Q3ULM0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccdc106Q3ULM0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccdc106Q3ULM0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.59■□□□□ 0.89
Ccdc106Q3ULM0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc106Q3ULM0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc106Q3ULM0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc106Q3ULM0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc106Q3ULM0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc106Q3ULM0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms