Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nell1Q2VWQ2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nell1Q2VWQ2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.26■■□□□ 1.15
Nell1Q2VWQ2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Nell1Q2VWQ2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nell1Q2VWQ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nell1Q2VWQ2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nell1Q2VWQ2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.22■■□□□ 1.15
Nell1Q2VWQ2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nell1Q2VWQ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Nell1Q2VWQ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Nell1Q2VWQ2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Nell1Q2VWQ2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nell1Q2VWQ2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Nell1Q2VWQ2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Nell1Q2VWQ2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nell1Q2VWQ2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Nell1Q2VWQ2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nell1Q2VWQ2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Nell1Q2VWQ2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nell1Q2VWQ2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.18■■□□□ 1.14
Nell1Q2VWQ2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nell1Q2VWQ2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nell1Q2VWQ2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nell1Q2VWQ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Nell1Q2VWQ2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nell1Q2VWQ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Nell1Q2VWQ2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nell1Q2VWQ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nell1Q2VWQ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.15■■□□□ 1.14
Nell1Q2VWQ2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.15■■□□□ 1.14
Nell1Q2VWQ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nell1Q2VWQ2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.13■■□□□ 1.13
Nell1Q2VWQ2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Nell1Q2VWQ2 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.13■■□□□ 1.13
Nell1Q2VWQ2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Nell1Q2VWQ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Nell1Q2VWQ2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.12■■□□□ 1.13
Nell1Q2VWQ2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nell1Q2VWQ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nell1Q2VWQ2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Nell1Q2VWQ2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nell1Q2VWQ2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nell1Q2VWQ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Nell1Q2VWQ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Terc-201ENSMUST00000082862 423 ntBASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nell1Q2VWQ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.08■■□□□ 1.13
Nell1Q2VWQ2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.08■■□□□ 1.13
Nell1Q2VWQ2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nell1Q2VWQ2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nell1Q2VWQ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nell1Q2VWQ2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Nell1Q2VWQ2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nell1Q2VWQ2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nell1Q2VWQ2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nell1Q2VWQ2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.06■■□□□ 1.12
Nell1Q2VWQ2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Nell1Q2VWQ2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nell1Q2VWQ2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nell1Q2VWQ2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nell1Q2VWQ2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nell1Q2VWQ2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.03■■□□□ 1.12
Nell1Q2VWQ2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.03■■□□□ 1.12
Nell1Q2VWQ2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nell1Q2VWQ2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nell1Q2VWQ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms