Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox18P43680 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox18P43680 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sox18P43680 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Sox18P43680 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox18P43680 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Sox18P43680 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox18P43680 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox18P43680 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox18P43680 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox18P43680 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox18P43680 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
Sox18P43680 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.97■■□□□ 1.11
Sox18P43680 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.97■■□□□ 1.11
Sox18P43680 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox18P43680 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox18P43680 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox18P43680 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sox18P43680 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.96■■□□□ 1.11
Sox18P43680 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
Sox18P43680 Terc-201ENSMUST00000082862 423 ntBASIC21.96■■□□□ 1.11
Sox18P43680 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.96■■□□□ 1.11
Sox18P43680 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox18P43680 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox18P43680 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox18P43680 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox18P43680 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox18P43680 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.95■■□□□ 1.1
Sox18P43680 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Sox18P43680 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox18P43680 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Sox18P43680 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.94■■□□□ 1.1
Sox18P43680 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sox18P43680 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.93■■□□□ 1.1
Sox18P43680 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox18P43680 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.92■■□□□ 1.1
Sox18P43680 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Sox18P43680 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sox18P43680 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox18P43680 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Sox18P43680 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.91■■□□□ 1.1
Sox18P43680 Gm45444-201ENSMUST00000211394 898 ntBASIC21.91■■□□□ 1.1
Sox18P43680 Gm9959-201ENSMUST00000068277 390 ntBASIC21.91■■□□□ 1.1
Sox18P43680 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sox18P43680 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Sox18P43680 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.9■■□□□ 1.1
Sox18P43680 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox18P43680 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sox18P43680 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Sox18P43680 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.9■■□□□ 1.1
Sox18P43680 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox18P43680 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Sox18P43680 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sox18P43680 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox18P43680 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Sox18P43680 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox18P43680 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Sox18P43680 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.88■■□□□ 1.09
Sox18P43680 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sox18P43680 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.88■■□□□ 1.09
Sox18P43680 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Sox18P43680 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox18P43680 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sox18P43680 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Sox18P43680 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sox18P43680 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.85■■□□□ 1.09
Sox18P43680 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sox18P43680 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox18P43680 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sox18P43680 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.84■■□□□ 1.09
Sox18P43680 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sox18P43680 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.84■■□□□ 1.09
Sox18P43680 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.84■■□□□ 1.09
Sox18P43680 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sox18P43680 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Sox18P43680 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.83■■□□□ 1.09
Sox18P43680 Gm44428-201ENSMUST00000204474 874 ntBASIC21.83■■□□□ 1.09
Sox18P43680 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sox18P43680 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Sox18P43680 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.82■■□□□ 1.08
Sox18P43680 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Sox18P43680 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sox18P43680 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.81■■□□□ 1.08
Sox18P43680 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Sox18P43680 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Sox18P43680 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Sox18P43680 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.79■■□□□ 1.08
Sox18P43680 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Sox18P43680 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.79■■□□□ 1.08
Sox18P43680 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Sox18P43680 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sox18P43680 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sox18P43680 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sox18P43680 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sox18P43680 Serp2-204ENSMUST00000228055 705 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms