Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Timp3P39876 Gm9812-201ENSMUST00000061934 968 ntBASIC18.46■□□□□ 0.55
Timp3P39876 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Timp3P39876 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Timp3P39876 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Timp3P39876 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Timp3P39876 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Timp3P39876 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.44■□□□□ 0.54
Timp3P39876 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Timp3P39876 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.43■□□□□ 0.54
Timp3P39876 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Timp3P39876 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Timp3P39876 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Timp3P39876 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Timp3P39876 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Timp3P39876 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Timp3P39876 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.42■□□□□ 0.54
Timp3P39876 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Timp3P39876 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp3P39876 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Timp3P39876 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.4■□□□□ 0.54
Timp3P39876 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.4■□□□□ 0.54
Timp3P39876 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.4■□□□□ 0.54
Timp3P39876 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp3P39876 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Timp3P39876 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Timp3P39876 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Timp3P39876 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Gm12366-201ENSMUST00000121722 873 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.39■□□□□ 0.53
Timp3P39876 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.39■□□□□ 0.53
Timp3P39876 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp3P39876 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Gm5786-201ENSMUST00000085368 882 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Timp3P39876 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Timp3P39876 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.39■□□□□ 0.53
Timp3P39876 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Timp3P39876 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Timp3P39876 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Timp3P39876 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.37■□□□□ 0.53
Timp3P39876 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp3P39876 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Timp3P39876 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Timp3P39876 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.36■□□□□ 0.53
Timp3P39876 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Timp3P39876 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.36■□□□□ 0.53
Timp3P39876 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Timp3P39876 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Timp3P39876 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Timp3P39876 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Timp3P39876 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Timp3P39876 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Timp3P39876 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Timp3P39876 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Timp3P39876 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Timp3P39876 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Timp3P39876 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.34■□□□□ 0.53
Timp3P39876 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.34■□□□□ 0.53
Timp3P39876 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Timp3P39876 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Timp3P39876 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.34■□□□□ 0.53
Timp3P39876 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.34■□□□□ 0.53
Timp3P39876 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.34■□□□□ 0.53
Timp3P39876 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Timp3P39876 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Timp3P39876 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Timp3P39876 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Timp3P39876 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Timp3P39876 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Timp3P39876 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Timp3P39876 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Timp3P39876 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Timp3P39876 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Timp3P39876 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.32■□□□□ 0.52
Timp3P39876 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Timp3P39876 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.32■□□□□ 0.52
Timp3P39876 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Timp3P39876 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.31■□□□□ 0.52
Timp3P39876 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Timp3P39876 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Timp3P39876 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Timp3P39876 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Timp3P39876 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.3■□□□□ 0.52
Timp3P39876 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Timp3P39876 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.3■□□□□ 0.52
Timp3P39876 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms