Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thbs1P35441 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thbs1P35441 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thbs1P35441 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.99■□□□□ 0.95
Thbs1P35441 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Thbs1P35441 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Thbs1P35441 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Thbs1P35441 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Thbs1P35441 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Thbs1P35441 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Thbs1P35441 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Thbs1P35441 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Thbs1P35441 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Thbs1P35441 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Thbs1P35441 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Thbs1P35441 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Thbs1P35441 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.95■□□□□ 0.94
Thbs1P35441 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Thbs1P35441 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.95■□□□□ 0.94
Thbs1P35441 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.95■□□□□ 0.94
Thbs1P35441 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.95■□□□□ 0.94
Thbs1P35441 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Thbs1P35441 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Thbs1P35441 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Thbs1P35441 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Thbs1P35441 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.93■□□□□ 0.94
Thbs1P35441 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.93■□□□□ 0.94
Thbs1P35441 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.92■□□□□ 0.94
Thbs1P35441 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Thbs1P35441 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Thbs1P35441 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.91■□□□□ 0.94
Thbs1P35441 Gm7432-201ENSMUST00000210343 879 ntBASIC20.91■□□□□ 0.94
Thbs1P35441 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Thbs1P35441 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Thbs1P35441 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.9■□□□□ 0.94
Thbs1P35441 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Thbs1P35441 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.89■□□□□ 0.93
Thbs1P35441 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Thbs1P35441 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.89■□□□□ 0.93
Thbs1P35441 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Thbs1P35441 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thbs1P35441 Gm4799-201ENSMUST00000095396 657 ntBASIC20.88■□□□□ 0.93
Thbs1P35441 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Thbs1P35441 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thbs1P35441 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thbs1P35441 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Thbs1P35441 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thbs1P35441 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.87■□□□□ 0.93
Thbs1P35441 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Thbs1P35441 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Thbs1P35441 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Thbs1P35441 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Thbs1P35441 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Thbs1P35441 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Thbs1P35441 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Thbs1P35441 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thbs1P35441 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Thbs1P35441 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thbs1P35441 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thbs1P35441 Gm11599-201ENSMUST00000118720 878 ntBASIC20.84■□□□□ 0.93
Thbs1P35441 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Thbs1P35441 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Thbs1P35441 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Thbs1P35441 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.82■□□□□ 0.92
Thbs1P35441 Gm9812-201ENSMUST00000061934 968 ntBASIC20.82■□□□□ 0.92
Thbs1P35441 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Thbs1P35441 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Thbs1P35441 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Thbs1P35441 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Thbs1P35441 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Thbs1P35441 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Thbs1P35441 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Thbs1P35441 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Thbs1P35441 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.8■□□□□ 0.92
Thbs1P35441 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thbs1P35441 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Thbs1P35441 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Thbs1P35441 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.79■□□□□ 0.92
Thbs1P35441 Mir3960-201ENSMUST00000198213 73 ntBASIC20.79■□□□□ 0.92
Thbs1P35441 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Thbs1P35441 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms