Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BckdkO55028 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BckdkO55028 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BckdkO55028 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BckdkO55028 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
BckdkO55028 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
BckdkO55028 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
BckdkO55028 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BckdkO55028 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
BckdkO55028 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BckdkO55028 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.88■□□□□ 0.93
BckdkO55028 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
BckdkO55028 Mir3960-201ENSMUST00000198213 73 ntBASIC20.88■□□□□ 0.93
BckdkO55028 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
BckdkO55028 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BckdkO55028 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
BckdkO55028 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BckdkO55028 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.87■□□□□ 0.93
BckdkO55028 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BckdkO55028 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BckdkO55028 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BckdkO55028 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BckdkO55028 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.86■□□□□ 0.93
BckdkO55028 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BckdkO55028 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BckdkO55028 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BckdkO55028 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BckdkO55028 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
BckdkO55028 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BckdkO55028 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
BckdkO55028 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BckdkO55028 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BckdkO55028 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
BckdkO55028 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
BckdkO55028 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Scarna2-201ENSMUST00000157560 414 ntBASIC20.82■□□□□ 0.92
BckdkO55028 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BckdkO55028 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BckdkO55028 Gm11687-201ENSMUST00000118911 886 ntBASIC20.81■□□□□ 0.92
BckdkO55028 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BckdkO55028 Gm9806-201ENSMUST00000051080 552 ntBASIC20.81■□□□□ 0.92
BckdkO55028 Cap2-205ENSMUST00000225824 1634 ntBASIC20.81■□□□□ 0.92
BckdkO55028 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
BckdkO55028 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.8■□□□□ 0.92
BckdkO55028 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BckdkO55028 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BckdkO55028 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.8■□□□□ 0.92
BckdkO55028 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
BckdkO55028 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BckdkO55028 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BckdkO55028 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BckdkO55028 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.79■□□□□ 0.92
BckdkO55028 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.79■□□□□ 0.92
BckdkO55028 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BckdkO55028 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BckdkO55028 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.78■□□□□ 0.92
BckdkO55028 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.78■□□□□ 0.92
BckdkO55028 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BckdkO55028 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BckdkO55028 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BckdkO55028 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BckdkO55028 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BckdkO55028 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.77■□□□□ 0.92
BckdkO55028 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.77■□□□□ 0.92
BckdkO55028 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
BckdkO55028 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BckdkO55028 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BckdkO55028 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.76■□□□□ 0.91
BckdkO55028 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BckdkO55028 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.76■□□□□ 0.91
BckdkO55028 Gm45364-201ENSMUST00000210883 159 ntBASIC20.76■□□□□ 0.91
BckdkO55028 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BckdkO55028 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BckdkO55028 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BckdkO55028 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BckdkO55028 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BckdkO55028 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BckdkO55028 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BckdkO55028 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BckdkO55028 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BckdkO55028 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
BckdkO55028 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BckdkO55028 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BckdkO55028 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BckdkO55028 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BckdkO55028 Gm16437-201ENSMUST00000025669 507 ntBASIC20.72■□□□□ 0.91
BckdkO55028 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BckdkO55028 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.72■□□□□ 0.91
BckdkO55028 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
BckdkO55028 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms