Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Capn1O35350 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.86■□□□□ 0.93
Capn1O35350 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Capn1O35350 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.86■□□□□ 0.93
Capn1O35350 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.85■□□□□ 0.93
Capn1O35350 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.85■□□□□ 0.93
Capn1O35350 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Capn1O35350 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Capn1O35350 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Capn1O35350 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capn1O35350 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capn1O35350 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capn1O35350 Gm9812-201ENSMUST00000061934 968 ntBASIC20.84■□□□□ 0.93
Capn1O35350 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Capn1O35350 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capn1O35350 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Capn1O35350 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.83■□□□□ 0.93
Capn1O35350 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Capn1O35350 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Capn1O35350 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Capn1O35350 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Capn1O35350 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Capn1O35350 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Capn1O35350 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Capn1O35350 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.82■□□□□ 0.92
Capn1O35350 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Capn1O35350 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.81■□□□□ 0.92
Capn1O35350 Gm27502-201ENSMUST00000183495 199 ntBASIC20.81■□□□□ 0.92
Capn1O35350 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Capn1O35350 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Capn1O35350 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.8■□□□□ 0.92
Capn1O35350 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capn1O35350 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capn1O35350 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capn1O35350 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capn1O35350 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
Capn1O35350 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Capn1O35350 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Capn1O35350 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Capn1O35350 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capn1O35350 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.79■□□□□ 0.92
Capn1O35350 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Capn1O35350 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Capn1O35350 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.77■□□□□ 0.92
Capn1O35350 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Capn1O35350 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.77■□□□□ 0.92
Capn1O35350 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Capn1O35350 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Capn1O35350 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Capn1O35350 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn1O35350 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Capn1O35350 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.76■□□□□ 0.91
Capn1O35350 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.75■□□□□ 0.91
Capn1O35350 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capn1O35350 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.74■□□□□ 0.91
Capn1O35350 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capn1O35350 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Capn1O35350 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn1O35350 Gm7332-201ENSMUST00000118351 454 ntBASIC20.73■□□□□ 0.91
Capn1O35350 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn1O35350 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.73■□□□□ 0.91
Capn1O35350 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.73■□□□□ 0.91
Capn1O35350 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Capn1O35350 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn1O35350 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capn1O35350 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capn1O35350 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Capn1O35350 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capn1O35350 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Capn1O35350 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Capn1O35350 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn1O35350 Gm14523-201ENSMUST00000117260 558 ntBASIC20.7■□□□□ 0.9
Capn1O35350 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn1O35350 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn1O35350 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capn1O35350 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Capn1O35350 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.69■□□□□ 0.9
Capn1O35350 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capn1O35350 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.69■□□□□ 0.9
Capn1O35350 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capn1O35350 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms