Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn20G5E8X0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn20G5E8X0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn20G5E8X0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn20G5E8X0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn20G5E8X0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.74■□□□□ 0.75
Cldn20G5E8X0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn20G5E8X0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cldn20G5E8X0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.73■□□□□ 0.75
Cldn20G5E8X0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.73■□□□□ 0.75
Cldn20G5E8X0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.73■□□□□ 0.75
Cldn20G5E8X0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Cldn20G5E8X0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Cldn20G5E8X0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cldn20G5E8X0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.7■□□□□ 0.74
Cldn20G5E8X0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cldn20G5E8X0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cldn20G5E8X0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cldn20G5E8X0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cldn20G5E8X0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn20G5E8X0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cldn20G5E8X0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.65■□□□□ 0.74
Cldn20G5E8X0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cldn20G5E8X0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn20G5E8X0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn20G5E8X0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cldn20G5E8X0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cldn20G5E8X0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn20G5E8X0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cldn20G5E8X0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Cldn20G5E8X0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cldn20G5E8X0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cldn20G5E8X0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cldn20G5E8X0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cldn20G5E8X0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cldn20G5E8X0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn20G5E8X0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn20G5E8X0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn20G5E8X0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn20G5E8X0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn20G5E8X0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cldn20G5E8X0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn20G5E8X0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn20G5E8X0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn20G5E8X0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn20G5E8X0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cldn20G5E8X0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cldn20G5E8X0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Cldn20G5E8X0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn20G5E8X0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn20G5E8X0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.57■□□□□ 0.72
Cldn20G5E8X0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn20G5E8X0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn20G5E8X0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn20G5E8X0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms