Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3543D3Z235 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Gm3543D3Z235 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Gm3543D3Z235 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3543D3Z235 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3543D3Z235 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3543D3Z235 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3543D3Z235 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Gm3543D3Z235 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3543D3Z235 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3543D3Z235 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3543D3Z235 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3543D3Z235 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3543D3Z235 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3543D3Z235 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3543D3Z235 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3543D3Z235 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Gm3543D3Z235 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3543D3Z235 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.37■□□□□ 0.85
Gm3543D3Z235 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3543D3Z235 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3543D3Z235 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.36■□□□□ 0.85
Gm3543D3Z235 Scarna2-201ENSMUST00000157560 414 ntBASIC20.36■□□□□ 0.85
Gm3543D3Z235 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3543D3Z235 Gm45364-201ENSMUST00000210883 159 ntBASIC20.36■□□□□ 0.85
Gm3543D3Z235 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3543D3Z235 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3543D3Z235 Gm11687-201ENSMUST00000118911 886 ntBASIC20.35■□□□□ 0.85
Gm3543D3Z235 Gm9806-201ENSMUST00000051080 552 ntBASIC20.35■□□□□ 0.85
Gm3543D3Z235 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3543D3Z235 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3543D3Z235 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3543D3Z235 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3543D3Z235 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3543D3Z235 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Gm3543D3Z235 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3543D3Z235 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3543D3Z235 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.32■□□□□ 0.84
Gm3543D3Z235 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3543D3Z235 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3543D3Z235 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3543D3Z235 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3543D3Z235 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3543D3Z235 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3543D3Z235 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3543D3Z235 Gm9812-201ENSMUST00000061934 968 ntBASIC20.29■□□□□ 0.84
Gm3543D3Z235 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3543D3Z235 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3543D3Z235 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3543D3Z235 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3543D3Z235 Gm16437-201ENSMUST00000025669 507 ntBASIC20.28■□□□□ 0.84
Gm3543D3Z235 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3543D3Z235 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.28■□□□□ 0.84
Gm3543D3Z235 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3543D3Z235 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3543D3Z235 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Gm3543D3Z235 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.26■□□□□ 0.83
Gm3543D3Z235 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3543D3Z235 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.26■□□□□ 0.83
Gm3543D3Z235 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3543D3Z235 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3543D3Z235 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.25■□□□□ 0.83
Gm3543D3Z235 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3543D3Z235 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3543D3Z235 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3543D3Z235 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Gm3543D3Z235 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.23■□□□□ 0.83
Gm3543D3Z235 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3543D3Z235 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3543D3Z235 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm3543D3Z235 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3543D3Z235 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm3543D3Z235 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3543D3Z235 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3543D3Z235 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3543D3Z235 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3543D3Z235 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3543D3Z235 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms