Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm12887B1AVM1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Gm12887B1AVM1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.41■□□□□ 0.54
Gm12887B1AVM1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12887B1AVM1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12887B1AVM1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm12887B1AVM1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm12887B1AVM1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Gm12887B1AVM1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm12887B1AVM1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm12887B1AVM1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Gm12887B1AVM1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12887B1AVM1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm12887B1AVM1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm12887B1AVM1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm12887B1AVM1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm12887B1AVM1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm12887B1AVM1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm12887B1AVM1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm12887B1AVM1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm12887B1AVM1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Gm12887B1AVM1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12887B1AVM1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12887B1AVM1 Gm30023-201ENSMUST00000197970 889 ntBASIC18.32■□□□□ 0.52
Gm12887B1AVM1 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.32■□□□□ 0.52
Gm12887B1AVM1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm12887B1AVM1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm12887B1AVM1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gm12887B1AVM1 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.31■□□□□ 0.52
Gm12887B1AVM1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm12887B1AVM1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12887B1AVM1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12887B1AVM1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12887B1AVM1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm12887B1AVM1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm12887B1AVM1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12887B1AVM1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm12887B1AVM1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm12887B1AVM1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm12887B1AVM1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm12887B1AVM1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12887B1AVM1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm12887B1AVM1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm12887B1AVM1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm12887B1AVM1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm12887B1AVM1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12887B1AVM1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm12887B1AVM1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms