Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16A0A075B653 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav16A0A075B653 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trav16A0A075B653 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16A0A075B653 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Trav16A0A075B653 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav16A0A075B653 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16A0A075B653 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16A0A075B653 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16A0A075B653 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav16A0A075B653 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16A0A075B653 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav16A0A075B653 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav16A0A075B653 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16A0A075B653 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav16A0A075B653 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav16A0A075B653 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16A0A075B653 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16A0A075B653 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16A0A075B653 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16A0A075B653 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav16A0A075B653 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.46■□□□□ 0.39
Trav16A0A075B653 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav16A0A075B653 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav16A0A075B653 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav16A0A075B653 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav16A0A075B653 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav16A0A075B653 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.44■□□□□ 0.38
Trav16A0A075B653 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav16A0A075B653 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav16A0A075B653 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.43■□□□□ 0.38
Trav16A0A075B653 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav16A0A075B653 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav16A0A075B653 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Trav16A0A075B653 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16A0A075B653 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16A0A075B653 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav16A0A075B653 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16A0A075B653 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16A0A075B653 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16A0A075B653 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.4■□□□□ 0.38
Trav16A0A075B653 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav16A0A075B653 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav16A0A075B653 Gm30023-201ENSMUST00000197970 889 ntBASIC17.39■□□□□ 0.37
Trav16A0A075B653 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav16A0A075B653 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav16A0A075B653 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav16A0A075B653 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav16A0A075B653 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav16A0A075B653 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav16A0A075B653 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16A0A075B653 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav16A0A075B653 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav16A0A075B653 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav16A0A075B653 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav16A0A075B653 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav16A0A075B653 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav16A0A075B653 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav16A0A075B653 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms