Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NclP09405 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
NclP09405 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
NclP09405 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
NclP09405 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NclP09405 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC23.05■■□□□ 1.28
NclP09405 Gm43575-201ENSMUST00000196420 516 ntBASIC23.05■■□□□ 1.28
NclP09405 Gm7229-201ENSMUST00000214719 1007 ntBASIC23.05■■□□□ 1.28
NclP09405 Ndufaf2-202ENSMUST00000223734 556 ntBASIC23.05■■□□□ 1.28
NclP09405 Bloc1s5-203ENSMUST00000224902 612 ntBASIC23.05■■□□□ 1.28
NclP09405 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NclP09405 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
NclP09405 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NclP09405 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC23.04■■□□□ 1.28
NclP09405 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
NclP09405 Gm44945-201ENSMUST00000206764 1187 ntBASIC23.04■■□□□ 1.28
NclP09405 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
NclP09405 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NclP09405 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC23.04■■□□□ 1.28
NclP09405 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NclP09405 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NclP09405 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
NclP09405 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Gm25911-201ENSMUST00000157621 56 ntBASIC23.03■■□□□ 1.28
NclP09405 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC23.03■■□□□ 1.28
NclP09405 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NclP09405 Gm38327-201ENSMUST00000195852 1755 ntBASIC23.03■■□□□ 1.28
NclP09405 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NclP09405 Grk6-207ENSMUST00000225925 2769 ntBASIC23.03■■□□□ 1.28
NclP09405 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NclP09405 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NclP09405 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC23.02■■□□□ 1.28
NclP09405 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Gm44729-201ENSMUST00000206759 2052 ntBASIC23.02■■□□□ 1.28
NclP09405 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC23.02■■□□□ 1.28
NclP09405 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NclP09405 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Gm14822-201ENSMUST00000122247 291 ntBASIC23.01■■□□□ 1.27
NclP09405 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC23.01■■□□□ 1.27
NclP09405 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC23.01■■□□□ 1.27
NclP09405 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Gm5366-201ENSMUST00000215494 1338 ntBASIC23.01■■□□□ 1.27
NclP09405 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NclP09405 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms