Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm5cP41230 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Kdm5cP41230 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm5cP41230 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Kdm5cP41230 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC22.52■■□□□ 1.2
Kdm5cP41230 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Kdm5cP41230 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Gm9794-201ENSMUST00000202370 423 ntBASIC22.52■■□□□ 1.2
Kdm5cP41230 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 AC115863.1-201ENSMUST00000214815 1813 ntBASIC22.52■■□□□ 1.2
Kdm5cP41230 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC22.52■■□□□ 1.2
Kdm5cP41230 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kdm5cP41230 Gm13337-201ENSMUST00000119183 1594 ntBASIC22.52■■□□□ 1.2
Kdm5cP41230 Gm14127-201ENSMUST00000117906 678 ntBASIC22.51■■□□□ 1.19
Kdm5cP41230 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm5cP41230 Gm27533-201ENSMUST00000183800 152 ntBASIC22.51■■□□□ 1.19
Kdm5cP41230 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Kdm5cP41230 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm5cP41230 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm5cP41230 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC22.51■■□□□ 1.19
Kdm5cP41230 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm5cP41230 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Kdm5cP41230 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Kdm5cP41230 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Gm8410-201ENSMUST00000117225 605 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Gm11543-201ENSMUST00000120758 370 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Syt7-204ENSMUST00000223586 1344 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Gm15483-201ENSMUST00000120338 456 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Gm15321-201ENSMUST00000121290 288 ntBASIC22.5■■□□□ 1.19
Kdm5cP41230 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC22.5■■□□□ 1.19
Kdm5cP41230 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kdm5cP41230 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 Gm18049-201ENSMUST00000208909 581 ntBASIC22.49■■□□□ 1.19
Kdm5cP41230 AC135669.1-201ENSMUST00000213585 412 ntBASIC22.49■■□□□ 1.19
Kdm5cP41230 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kdm5cP41230 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Kdm5cP41230 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Kdm5cP41230 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Gm27920-201ENSMUST00000183953 96 ntBASIC22.48■■□□□ 1.19
Kdm5cP41230 Gm18766-201ENSMUST00000189811 808 ntBASIC22.48■■□□□ 1.19
Kdm5cP41230 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Kdm5cP41230 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC22.48■■□□□ 1.19
Kdm5cP41230 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kdm5cP41230 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Kdm5cP41230 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Kdm5cP41230 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Kdm5cP41230 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Kdm5cP41230 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC22.47■■□□□ 1.19
Kdm5cP41230 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Kdm5cP41230 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm5cP41230 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm5cP41230 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm5cP41230 Gm38225-201ENSMUST00000194001 393 ntBASIC22.46■■□□□ 1.19
Kdm5cP41230 AC124732.1-201ENSMUST00000221551 910 ntBASIC22.46■■□□□ 1.19
Kdm5cP41230 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Kdm5cP41230 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms