Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rtl1Q7M732 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Gm13337-201ENSMUST00000119183 1594 ntBASIC27.82■■■□□ 2.04
Rtl1Q7M732 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Gm27397-201ENSMUST00000184997 107 ntBASIC27.82■■■□□ 2.04
Rtl1Q7M732 Gm43125-201ENSMUST00000201724 730 ntBASIC27.82■■■□□ 2.04
Rtl1Q7M732 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtl1Q7M732 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC27.81■■■□□ 2.04
Rtl1Q7M732 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Tfap2a-203ENSMUST00000223869 2037 ntBASIC27.81■■■□□ 2.04
Rtl1Q7M732 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Rtl1Q7M732 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtl1Q7M732 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Gm27301-201ENSMUST00000184012 127 ntBASIC27.8■■■□□ 2.04
Rtl1Q7M732 CT943659.1-201ENSMUST00000215459 326 ntBASIC27.8■■■□□ 2.04
Rtl1Q7M732 Chchd1-203ENSMUST00000224633 557 ntBASIC27.8■■■□□ 2.04
Rtl1Q7M732 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtl1Q7M732 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC27.79■■■□□ 2.04
Rtl1Q7M732 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Hivep3-201ENSMUST00000084306 2973 ntBASIC27.79■■■□□ 2.04
Rtl1Q7M732 Asic1-205ENSMUST00000228185 1818 ntBASIC27.79■■■□□ 2.04
Rtl1Q7M732 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rtl1Q7M732 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rtl1Q7M732 Gm6736-201ENSMUST00000166583 948 ntBASIC27.78■■■□□ 2.04
Rtl1Q7M732 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC27.77■■■□□ 2.04
Rtl1Q7M732 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC27.77■■■□□ 2.04
Rtl1Q7M732 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Thap2-203ENSMUST00000218989 527 ntBASIC27.77■■■□□ 2.04
Rtl1Q7M732 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rtl1Q7M732 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rtl1Q7M732 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Rtl1Q7M732 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC27.76■■■□□ 2.03
Rtl1Q7M732 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rtl1Q7M732 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Gm15500-202ENSMUST00000071641 1019 ntBASIC27.75■■■□□ 2.03
Rtl1Q7M732 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rtl1Q7M732 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms