Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Uspl1Q3ULM6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Gm6089-201ENSMUST00000197666 938 ntBASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Uspl1Q3ULM6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Uspl1Q3ULM6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Gm13884-201ENSMUST00000118103 829 ntBASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Gm11452-201ENSMUST00000122376 690 ntBASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Gm27741-201ENSMUST00000185060 237 ntBASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Uspl1Q3ULM6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Uspl1Q3ULM6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Uspl1Q3ULM6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Uspl1Q3ULM6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms