Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Crlf1Q9JM58 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf1Q9JM58 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.83■□□□□ 0.6
Crlf1Q9JM58 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf1Q9JM58 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Crlf1Q9JM58 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf1Q9JM58 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Crlf1Q9JM58 Gm14117-201ENSMUST00000122417 843 ntBASIC18.82■□□□□ 0.6
Crlf1Q9JM58 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Crlf1Q9JM58 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Crlf1Q9JM58 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.81■□□□□ 0.6
Crlf1Q9JM58 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.81■□□□□ 0.6
Crlf1Q9JM58 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.81■□□□□ 0.6
Crlf1Q9JM58 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Crlf1Q9JM58 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Crlf1Q9JM58 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Crlf1Q9JM58 Gm43566-201ENSMUST00000196851 808 ntBASIC18.8■□□□□ 0.6
Crlf1Q9JM58 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.79■□□□□ 0.6
Crlf1Q9JM58 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Terc-201ENSMUST00000082862 423 ntBASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Crlf1Q9JM58 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Crlf1Q9JM58 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Crlf1Q9JM58 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Gm13238-201ENSMUST00000117655 780 ntBASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Crlf1Q9JM58 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Crlf1Q9JM58 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.73■□□□□ 0.59
Crlf1Q9JM58 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf1Q9JM58 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.73■□□□□ 0.59
Crlf1Q9JM58 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Crlf1Q9JM58 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Crlf1Q9JM58 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
Crlf1Q9JM58 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.72■□□□□ 0.59
Crlf1Q9JM58 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.72■□□□□ 0.59
Crlf1Q9JM58 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf1Q9JM58 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Crlf1Q9JM58 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Crlf1Q9JM58 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.7■□□□□ 0.58
Crlf1Q9JM58 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Crlf1Q9JM58 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Gm45444-201ENSMUST00000211394 898 ntBASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Gm9959-201ENSMUST00000068277 390 ntBASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Crlf1Q9JM58 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf1Q9JM58 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Crlf1Q9JM58 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Crlf1Q9JM58 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Gm44428-201ENSMUST00000204474 874 ntBASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.67■□□□□ 0.58
Crlf1Q9JM58 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf1Q9JM58 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf1Q9JM58 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf1Q9JM58 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crlf1Q9JM58 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Crlf1Q9JM58 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.64■□□□□ 0.57
Crlf1Q9JM58 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crlf1Q9JM58 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crlf1Q9JM58 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Crlf1Q9JM58 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms