Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vmn1r40Q9EQ46 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r40Q9EQ46 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Vmn1r40Q9EQ46 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r40Q9EQ46 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r40Q9EQ46 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.89■■□□□ 1.1
Vmn1r40Q9EQ46 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vmn1r40Q9EQ46 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vmn1r40Q9EQ46 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Terc-201ENSMUST00000082862 423 ntBASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r40Q9EQ46 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.87■■□□□ 1.09
Vmn1r40Q9EQ46 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Vmn1r40Q9EQ46 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r40Q9EQ46 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Gm12366-201ENSMUST00000121722 873 ntBASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Gm5786-201ENSMUST00000085368 882 ntBASIC21.86■■□□□ 1.09
Vmn1r40Q9EQ46 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r40Q9EQ46 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r40Q9EQ46 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r40Q9EQ46 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r40Q9EQ46 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vmn1r40Q9EQ46 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.84■■□□□ 1.09
Vmn1r40Q9EQ46 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r40Q9EQ46 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r40Q9EQ46 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r40Q9EQ46 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r40Q9EQ46 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r40Q9EQ46 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r40Q9EQ46 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.83■■□□□ 1.08
Vmn1r40Q9EQ46 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r40Q9EQ46 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r40Q9EQ46 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.82■■□□□ 1.08
Vmn1r40Q9EQ46 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vmn1r40Q9EQ46 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r40Q9EQ46 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r40Q9EQ46 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r40Q9EQ46 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r40Q9EQ46 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Vmn1r40Q9EQ46 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r40Q9EQ46 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r40Q9EQ46 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r40Q9EQ46 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r40Q9EQ46 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vmn1r40Q9EQ46 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vmn1r40Q9EQ46 Gm27502-201ENSMUST00000183495 199 ntBASIC21.77■■□□□ 1.08
Vmn1r40Q9EQ46 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vmn1r40Q9EQ46 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r40Q9EQ46 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r40Q9EQ46 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Vmn1r40Q9EQ46 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r40Q9EQ46 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r40Q9EQ46 Gm14523-201ENSMUST00000117260 558 ntBASIC21.73■■□□□ 1.07
Vmn1r40Q9EQ46 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.73■■□□□ 1.07
Vmn1r40Q9EQ46 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r40Q9EQ46 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Vmn1r40Q9EQ46 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r40Q9EQ46 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r40Q9EQ46 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r40Q9EQ46 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r40Q9EQ46 Gm7332-201ENSMUST00000118351 454 ntBASIC21.71■■□□□ 1.07
Vmn1r40Q9EQ46 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r40Q9EQ46 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r40Q9EQ46 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Vmn1r40Q9EQ46 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Vmn1r40Q9EQ46 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r40Q9EQ46 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r40Q9EQ46 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms