Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Taf1dQ9D4V4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Taf1dQ9D4V4 Gm13238-201ENSMUST00000117655 780 ntBASIC28.67■■■□□ 2.18
Taf1dQ9D4V4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Taf1dQ9D4V4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Taf1dQ9D4V4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Taf1dQ9D4V4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.66■■■□□ 2.18
Taf1dQ9D4V4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Taf1dQ9D4V4 Gm14117-201ENSMUST00000122417 843 ntBASIC28.65■■■□□ 2.18
Taf1dQ9D4V4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Taf1dQ9D4V4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Taf1dQ9D4V4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Taf1dQ9D4V4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Taf1dQ9D4V4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.62■■■□□ 2.17
Taf1dQ9D4V4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.62■■■□□ 2.17
Taf1dQ9D4V4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.61■■■□□ 2.17
Taf1dQ9D4V4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.61■■■□□ 2.17
Taf1dQ9D4V4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Taf1dQ9D4V4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Taf1dQ9D4V4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.6■■■□□ 2.17
Taf1dQ9D4V4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.59■■■□□ 2.17
Taf1dQ9D4V4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Taf1dQ9D4V4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.58■■■□□ 2.17
Taf1dQ9D4V4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Taf1dQ9D4V4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Taf1dQ9D4V4 Gm43566-201ENSMUST00000196851 808 ntBASIC28.57■■■□□ 2.16
Taf1dQ9D4V4 Terc-201ENSMUST00000082862 423 ntBASIC28.57■■■□□ 2.16
Taf1dQ9D4V4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.57■■■□□ 2.16
Taf1dQ9D4V4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Taf1dQ9D4V4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Taf1dQ9D4V4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Taf1dQ9D4V4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Taf1dQ9D4V4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Taf1dQ9D4V4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.52■■■□□ 2.16
Taf1dQ9D4V4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
Taf1dQ9D4V4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.52■■■□□ 2.16
Taf1dQ9D4V4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Taf1dQ9D4V4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Taf1dQ9D4V4 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.51■■■□□ 2.15
Taf1dQ9D4V4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.51■■■□□ 2.15
Taf1dQ9D4V4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Taf1dQ9D4V4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.5■■■□□ 2.15
Taf1dQ9D4V4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Taf1dQ9D4V4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Taf1dQ9D4V4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Taf1dQ9D4V4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Taf1dQ9D4V4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.46■■■□□ 2.15
Taf1dQ9D4V4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
Taf1dQ9D4V4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Taf1dQ9D4V4 Gm9959-201ENSMUST00000068277 390 ntBASIC28.46■■■□□ 2.15
Taf1dQ9D4V4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Taf1dQ9D4V4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Taf1dQ9D4V4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Taf1dQ9D4V4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.43■■■□□ 2.14
Taf1dQ9D4V4 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Taf1dQ9D4V4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Taf1dQ9D4V4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Taf1dQ9D4V4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Taf1dQ9D4V4 Gm42501-201ENSMUST00000200220 1026 ntBASIC28.42■■■□□ 2.14
Taf1dQ9D4V4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC28.42■■■□□ 2.14
Taf1dQ9D4V4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Taf1dQ9D4V4 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.41■■■□□ 2.14
Taf1dQ9D4V4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Taf1dQ9D4V4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Taf1dQ9D4V4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28.4■■■□□ 2.14
Taf1dQ9D4V4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Taf1dQ9D4V4 Gm45444-201ENSMUST00000211394 898 ntBASIC28.39■■■□□ 2.14
Taf1dQ9D4V4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Taf1dQ9D4V4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC28.38■■■□□ 2.13
Taf1dQ9D4V4 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.38■■■□□ 2.13
Taf1dQ9D4V4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.37■■■□□ 2.13
Taf1dQ9D4V4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC28.37■■■□□ 2.13
Taf1dQ9D4V4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Taf1dQ9D4V4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
Taf1dQ9D4V4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Taf1dQ9D4V4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Taf1dQ9D4V4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Taf1dQ9D4V4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Gm44428-201ENSMUST00000204474 874 ntBASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Taf1dQ9D4V4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
Taf1dQ9D4V4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms