Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Gm9812-201ENSMUST00000061934 968 ntBASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Zxda-201ENSMUST00000117281 2621 ntBASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Gm9910-201ENSMUST00000195385 1550 ntBASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61bQ9CQS8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61bQ9CQS8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Gm14523-201ENSMUST00000117260 558 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Gm27502-201ENSMUST00000183495 199 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Terc-201ENSMUST00000082862 423 ntBASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Gm37847-201ENSMUST00000192163 1497 ntBASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Gm31748-201ENSMUST00000194938 1497 ntBASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms