Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim16Q99PP9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim16Q99PP9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim16Q99PP9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Trim16Q99PP9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim16Q99PP9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Trim16Q99PP9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim16Q99PP9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trim16Q99PP9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim16Q99PP9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim16Q99PP9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim16Q99PP9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.18■■□□□ 1.14
Trim16Q99PP9 Particl-201ENSMUST00000205370 1560 ntBASIC22.17■■□□□ 1.14
Trim16Q99PP9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim16Q99PP9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim16Q99PP9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
Trim16Q99PP9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
Trim16Q99PP9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim16Q99PP9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.15■■□□□ 1.14
Trim16Q99PP9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim16Q99PP9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim16Q99PP9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim16Q99PP9 Gm7432-201ENSMUST00000210343 879 ntBASIC22.14■■□□□ 1.13
Trim16Q99PP9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim16Q99PP9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Trim16Q99PP9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim16Q99PP9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Trim16Q99PP9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim16Q99PP9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim16Q99PP9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim16Q99PP9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.11■■□□□ 1.13
Trim16Q99PP9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trim16Q99PP9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.1■■□□□ 1.13
Trim16Q99PP9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trim16Q99PP9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim16Q99PP9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
Trim16Q99PP9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.09■■□□□ 1.13
Trim16Q99PP9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim16Q99PP9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim16Q99PP9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Trim16Q99PP9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.08■■□□□ 1.13
Trim16Q99PP9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim16Q99PP9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim16Q99PP9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim16Q99PP9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim16Q99PP9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim16Q99PP9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.07■■□□□ 1.12
Trim16Q99PP9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim16Q99PP9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.07■■□□□ 1.12
Trim16Q99PP9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.07■■□□□ 1.12
Trim16Q99PP9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.06■■□□□ 1.12
Trim16Q99PP9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Trim16Q99PP9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim16Q99PP9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim16Q99PP9 Gm11599-201ENSMUST00000118720 878 ntBASIC22.04■■□□□ 1.12
Trim16Q99PP9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trim16Q99PP9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim16Q99PP9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim16Q99PP9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim16Q99PP9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim16Q99PP9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim16Q99PP9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim16Q99PP9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.02■■□□□ 1.12
Trim16Q99PP9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim16Q99PP9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim16Q99PP9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim16Q99PP9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim16Q99PP9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.01■■□□□ 1.11
Trim16Q99PP9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim16Q99PP9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim16Q99PP9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim16Q99PP9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim16Q99PP9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Trim16Q99PP9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms