Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha1Q91Y21 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha1Q91Y21 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha1Q91Y21 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Gm11687-201ENSMUST00000118911 886 ntBASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 Gm16437-201ENSMUST00000025669 507 ntBASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha1Q91Y21 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.97■■□□□ 1.43
Pcdha1Q91Y21 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha1Q91Y21 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Gm9812-201ENSMUST00000061934 968 ntBASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha1Q91Y21 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha1Q91Y21 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha1Q91Y21 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha1Q91Y21 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.89■■□□□ 1.41
Pcdha1Q91Y21 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha1Q91Y21 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm12366-201ENSMUST00000121722 873 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm5786-201ENSMUST00000085368 882 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha1Q91Y21 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.85■■□□□ 1.41
Pcdha1Q91Y21 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdha1Q91Y21 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdha1Q91Y21 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms