Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhga4Q91XY4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhga4Q91XY4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhga4Q91XY4 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.33■■□□□ 1.17
Pcdhga4Q91XY4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Pcdhga4Q91XY4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhga4Q91XY4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhga4Q91XY4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhga4Q91XY4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
Pcdhga4Q91XY4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.29■■□□□ 1.16
Pcdhga4Q91XY4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhga4Q91XY4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhga4Q91XY4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga4Q91XY4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga4Q91XY4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhga4Q91XY4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.28■■□□□ 1.16
Pcdhga4Q91XY4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Mir3960-201ENSMUST00000198213 73 ntBASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pcdhga4Q91XY4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhga4Q91XY4 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.26■■□□□ 1.15
Pcdhga4Q91XY4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pcdhga4Q91XY4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhga4Q91XY4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga4Q91XY4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.25■■□□□ 1.15
Pcdhga4Q91XY4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga4Q91XY4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga4Q91XY4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhga4Q91XY4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdhga4Q91XY4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhga4Q91XY4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga4Q91XY4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.22■■□□□ 1.15
Pcdhga4Q91XY4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga4Q91XY4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhga4Q91XY4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga4Q91XY4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga4Q91XY4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga4Q91XY4 Mir6538-201ENSMUST00000183713 110 ntBASIC22.21■■□□□ 1.15
Pcdhga4Q91XY4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhga4Q91XY4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.2■■□□□ 1.14
Pcdhga4Q91XY4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga4Q91XY4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga4Q91XY4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhga4Q91XY4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Pcdhga4Q91XY4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.18■■□□□ 1.14
Pcdhga4Q91XY4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga4Q91XY4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhga4Q91XY4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga4Q91XY4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhga4Q91XY4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga4Q91XY4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga4Q91XY4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhga4Q91XY4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga4Q91XY4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pcdhga4Q91XY4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhga4Q91XY4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.16■■□□□ 1.14
Pcdhga4Q91XY4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga4Q91XY4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga4Q91XY4 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.15■■□□□ 1.14
Pcdhga4Q91XY4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhga4Q91XY4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
Pcdhga4Q91XY4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga4Q91XY4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdhga4Q91XY4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga4Q91XY4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga4Q91XY4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhga4Q91XY4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhga4Q91XY4 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.12■■□□□ 1.13
Pcdhga4Q91XY4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdhga4Q91XY4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.12■■□□□ 1.13
Pcdhga4Q91XY4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 242.6 ms