Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga6Q91XY2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhga6Q91XY2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga6Q91XY2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.72■■□□□ 1.23
Pcdhga6Q91XY2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.71■■□□□ 1.23
Pcdhga6Q91XY2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga6Q91XY2 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.71■■□□□ 1.23
Pcdhga6Q91XY2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhga6Q91XY2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.7■■□□□ 1.22
Pcdhga6Q91XY2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga6Q91XY2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga6Q91XY2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga6Q91XY2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhga6Q91XY2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga6Q91XY2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Pcdhga6Q91XY2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga6Q91XY2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga6Q91XY2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhga6Q91XY2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhga6Q91XY2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhga6Q91XY2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhga6Q91XY2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.66■■□□□ 1.22
Pcdhga6Q91XY2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
Pcdhga6Q91XY2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhga6Q91XY2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdhga6Q91XY2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.64■■□□□ 1.21
Pcdhga6Q91XY2 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.64■■□□□ 1.21
Pcdhga6Q91XY2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Pcdhga6Q91XY2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhga6Q91XY2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhga6Q91XY2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhga6Q91XY2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.61■■□□□ 1.21
Pcdhga6Q91XY2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhga6Q91XY2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhga6Q91XY2 Gm9812-201ENSMUST00000061934 968 ntBASIC22.59■■□□□ 1.21
Pcdhga6Q91XY2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhga6Q91XY2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.58■■□□□ 1.21
Pcdhga6Q91XY2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Pcdhga6Q91XY2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhga6Q91XY2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhga6Q91XY2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.56■■□□□ 1.2
Pcdhga6Q91XY2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhga6Q91XY2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhga6Q91XY2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga6Q91XY2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhga6Q91XY2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhga6Q91XY2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 Rps24-207ENSMUST00000224568 714 ntBASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhga6Q91XY2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhga6Q91XY2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhga6Q91XY2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.51■■□□□ 1.19
Pcdhga6Q91XY2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdhga6Q91XY2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga6Q91XY2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdhga6Q91XY2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Pcdhga6Q91XY2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms