Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lin28aQ8K3Y3 Mir6538-201ENSMUST00000183713 110 ntBASIC21.47■■□□□ 1.03
Lin28aQ8K3Y3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.47■■□□□ 1.03
Lin28aQ8K3Y3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lin28aQ8K3Y3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Lin28aQ8K3Y3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lin28aQ8K3Y3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.46■■□□□ 1.03
Lin28aQ8K3Y3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.45■■□□□ 1.02
Lin28aQ8K3Y3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.45■■□□□ 1.02
Lin28aQ8K3Y3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.44■■□□□ 1.02
Lin28aQ8K3Y3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lin28aQ8K3Y3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lin28aQ8K3Y3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lin28aQ8K3Y3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lin28aQ8K3Y3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28aQ8K3Y3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lin28aQ8K3Y3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Lin28aQ8K3Y3 Gm9812-201ENSMUST00000061934 968 ntBASIC21.39■■□□□ 1.01
Lin28aQ8K3Y3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28aQ8K3Y3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28aQ8K3Y3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28aQ8K3Y3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lin28aQ8K3Y3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Lin28aQ8K3Y3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lin28aQ8K3Y3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Lin28aQ8K3Y3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lin28aQ8K3Y3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28aQ8K3Y3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28aQ8K3Y3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.36■■□□□ 1.01
Lin28aQ8K3Y3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lin28aQ8K3Y3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Lin28aQ8K3Y3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lin28aQ8K3Y3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lin28aQ8K3Y3 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.35■■□□□ 1.01
Lin28aQ8K3Y3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.34■■□□□ 1.01
Lin28aQ8K3Y3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lin28aQ8K3Y3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lin28aQ8K3Y3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lin28aQ8K3Y3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.33■■□□□ 1.01
Lin28aQ8K3Y3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Lin28aQ8K3Y3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lin28aQ8K3Y3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lin28aQ8K3Y3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Lin28aQ8K3Y3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.32■■□□□ 1
Lin28aQ8K3Y3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Lin28aQ8K3Y3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.32■■□□□ 1
Lin28aQ8K3Y3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lin28aQ8K3Y3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lin28aQ8K3Y3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.31■■□□□ 1
Lin28aQ8K3Y3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Lin28aQ8K3Y3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Lin28aQ8K3Y3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.3■■□□□ 1
Lin28aQ8K3Y3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.3■■□□□ 1
Lin28aQ8K3Y3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lin28aQ8K3Y3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.3■■□□□ 1
Lin28aQ8K3Y3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lin28aQ8K3Y3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.29■■□□□ 1
Lin28aQ8K3Y3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.29■■□□□ 1
Lin28aQ8K3Y3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Lin28aQ8K3Y3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.28■■□□□ 1
Lin28aQ8K3Y3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
Lin28aQ8K3Y3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lin28aQ8K3Y3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.27■■□□□ 1
Lin28aQ8K3Y3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Lin28aQ8K3Y3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lin28aQ8K3Y3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lin28aQ8K3Y3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms