Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nckap1lQ8K1X4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nckap1lQ8K1X4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Nckap1lQ8K1X4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Nckap1lQ8K1X4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Nckap1lQ8K1X4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Nckap1lQ8K1X4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Nckap1lQ8K1X4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nckap1lQ8K1X4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.19■■□□□ 1.14
Nckap1lQ8K1X4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nckap1lQ8K1X4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Nckap1lQ8K1X4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Nckap1lQ8K1X4 Gm8503-201ENSMUST00000118131 455 ntBASIC22.17■■□□□ 1.14
Nckap1lQ8K1X4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nckap1lQ8K1X4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Nckap1lQ8K1X4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Nckap1lQ8K1X4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nckap1lQ8K1X4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Nckap1lQ8K1X4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Nckap1lQ8K1X4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Nckap1lQ8K1X4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.14■■□□□ 1.13
Nckap1lQ8K1X4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Nckap1lQ8K1X4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Nckap1lQ8K1X4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nckap1lQ8K1X4 Particl-201ENSMUST00000205370 1560 ntBASIC22.13■■□□□ 1.13
Nckap1lQ8K1X4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nckap1lQ8K1X4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Nckap1lQ8K1X4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Nckap1lQ8K1X4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Nckap1lQ8K1X4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nckap1lQ8K1X4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Nckap1lQ8K1X4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.11■■□□□ 1.13
Nckap1lQ8K1X4 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.11■■□□□ 1.13
Nckap1lQ8K1X4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nckap1lQ8K1X4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Nckap1lQ8K1X4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Nckap1lQ8K1X4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Nckap1lQ8K1X4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nckap1lQ8K1X4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Nckap1lQ8K1X4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nckap1lQ8K1X4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Nckap1lQ8K1X4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nckap1lQ8K1X4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Nckap1lQ8K1X4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Nckap1lQ8K1X4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nckap1lQ8K1X4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nckap1lQ8K1X4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nckap1lQ8K1X4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Nckap1lQ8K1X4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
Nckap1lQ8K1X4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nckap1lQ8K1X4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Nckap1lQ8K1X4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.05■■□□□ 1.12
Nckap1lQ8K1X4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nckap1lQ8K1X4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Nckap1lQ8K1X4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nckap1lQ8K1X4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nckap1lQ8K1X4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nckap1lQ8K1X4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nckap1lQ8K1X4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nckap1lQ8K1X4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Nckap1lQ8K1X4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nckap1lQ8K1X4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1lQ8K1X4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1lQ8K1X4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1lQ8K1X4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1lQ8K1X4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1lQ8K1X4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1lQ8K1X4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1lQ8K1X4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1lQ8K1X4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Nckap1lQ8K1X4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nckap1lQ8K1X4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.97■■□□□ 1.11
Nckap1lQ8K1X4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1lQ8K1X4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms