Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Zc3h3Q8CHP0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Zc3h3Q8CHP0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.29■■□□□ 1.32
Zc3h3Q8CHP0 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.29■■□□□ 1.32
Zc3h3Q8CHP0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Zc3h3Q8CHP0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.27■■□□□ 1.32
Zc3h3Q8CHP0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Gm13238-201ENSMUST00000117655 780 ntBASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Zc3h3Q8CHP0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Zc3h3Q8CHP0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Zc3h3Q8CHP0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Zc3h3Q8CHP0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.23■■□□□ 1.31
Zc3h3Q8CHP0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zc3h3Q8CHP0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zc3h3Q8CHP0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Zc3h3Q8CHP0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Zc3h3Q8CHP0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.22■■□□□ 1.31
Zc3h3Q8CHP0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Zc3h3Q8CHP0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Gm43566-201ENSMUST00000196851 808 ntBASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h3Q8CHP0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h3Q8CHP0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
Zc3h3Q8CHP0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Zc3h3Q8CHP0 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.2■■□□□ 1.3
Zc3h3Q8CHP0 Terc-201ENSMUST00000082862 423 ntBASIC23.2■■□□□ 1.3
Zc3h3Q8CHP0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.19■■□□□ 1.3
Zc3h3Q8CHP0 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.19■■□□□ 1.3
Zc3h3Q8CHP0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Zc3h3Q8CHP0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.18■■□□□ 1.3
Zc3h3Q8CHP0 Gm9959-201ENSMUST00000068277 390 ntBASIC23.17■■□□□ 1.3
Zc3h3Q8CHP0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.17■■□□□ 1.3
Zc3h3Q8CHP0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Zc3h3Q8CHP0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Zc3h3Q8CHP0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Zc3h3Q8CHP0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Zc3h3Q8CHP0 Gm45444-201ENSMUST00000211394 898 ntBASIC23.14■■□□□ 1.29
Zc3h3Q8CHP0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Zc3h3Q8CHP0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Zc3h3Q8CHP0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Zc3h3Q8CHP0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Zc3h3Q8CHP0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Zc3h3Q8CHP0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Zc3h3Q8CHP0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.11■■□□□ 1.29
Zc3h3Q8CHP0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Zc3h3Q8CHP0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.1■■□□□ 1.29
Zc3h3Q8CHP0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Zc3h3Q8CHP0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Zc3h3Q8CHP0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Zc3h3Q8CHP0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Zc3h3Q8CHP0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Zc3h3Q8CHP0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Zc3h3Q8CHP0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.08■■□□□ 1.29
Zc3h3Q8CHP0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Zc3h3Q8CHP0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.07■■□□□ 1.28
Zc3h3Q8CHP0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Zc3h3Q8CHP0 Serp2-204ENSMUST00000228055 705 ntBASIC23.07■■□□□ 1.28
Zc3h3Q8CHP0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Zc3h3Q8CHP0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Zc3h3Q8CHP0 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.06■■□□□ 1.28
Zc3h3Q8CHP0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.06■■□□□ 1.28
Zc3h3Q8CHP0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h3Q8CHP0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h3Q8CHP0 Gm44428-201ENSMUST00000204474 874 ntBASIC23.05■■□□□ 1.28
Zc3h3Q8CHP0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h3Q8CHP0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Zc3h3Q8CHP0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.04■■□□□ 1.28
Zc3h3Q8CHP0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.04■■□□□ 1.28
Zc3h3Q8CHP0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Zc3h3Q8CHP0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Zc3h3Q8CHP0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Zc3h3Q8CHP0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Zc3h3Q8CHP0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.02■■□□□ 1.28
Zc3h3Q8CHP0 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.02■■□□□ 1.28
Zc3h3Q8CHP0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Zc3h3Q8CHP0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Zc3h3Q8CHP0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Zc3h3Q8CHP0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms