Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp28Q8CGV8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp28Q8CGV8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp28Q8CGV8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp28Q8CGV8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp28Q8CGV8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp28Q8CGV8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp28Q8CGV8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp28Q8CGV8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp28Q8CGV8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp28Q8CGV8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.47■□□□□ 0.71
Mmp28Q8CGV8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp28Q8CGV8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp28Q8CGV8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Mmp28Q8CGV8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp28Q8CGV8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp28Q8CGV8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp28Q8CGV8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp28Q8CGV8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp28Q8CGV8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp28Q8CGV8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp28Q8CGV8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp28Q8CGV8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Mmp28Q8CGV8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp28Q8CGV8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp28Q8CGV8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp28Q8CGV8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp28Q8CGV8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp28Q8CGV8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp28Q8CGV8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp28Q8CGV8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp28Q8CGV8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Mmp28Q8CGV8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp28Q8CGV8 Zfp131-205ENSMUST00000223812 663 ntBASIC19.37■□□□□ 0.69
Mmp28Q8CGV8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp28Q8CGV8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp28Q8CGV8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp28Q8CGV8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Mmp28Q8CGV8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp28Q8CGV8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp28Q8CGV8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Mmp28Q8CGV8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mmp28Q8CGV8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Mmp28Q8CGV8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mmp28Q8CGV8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms