Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rbm28Q8CGC6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rbm28Q8CGC6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rbm28Q8CGC6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Rbm28Q8CGC6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rbm28Q8CGC6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Rbm28Q8CGC6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rbm28Q8CGC6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Gm12366-201ENSMUST00000121722 873 ntBASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Gm5786-201ENSMUST00000085368 882 ntBASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rbm28Q8CGC6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Gm9812-201ENSMUST00000061934 968 ntBASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rbm28Q8CGC6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.05■■□□□ 1.92
Rbm28Q8CGC6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rbm28Q8CGC6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rbm28Q8CGC6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Rbm28Q8CGC6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rbm28Q8CGC6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rbm28Q8CGC6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rbm28Q8CGC6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Rbm28Q8CGC6 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.01■■□□□ 1.91
Rbm28Q8CGC6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Rbm28Q8CGC6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rbm28Q8CGC6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rbm28Q8CGC6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Rbm28Q8CGC6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rbm28Q8CGC6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rbm28Q8CGC6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rbm28Q8CGC6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rbm28Q8CGC6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.97■■□□□ 1.91
Rbm28Q8CGC6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Rbm28Q8CGC6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Rbm28Q8CGC6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rbm28Q8CGC6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rbm28Q8CGC6 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.96■■□□□ 1.91
Rbm28Q8CGC6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Rbm28Q8CGC6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Rbm28Q8CGC6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Rbm28Q8CGC6 Gm27502-201ENSMUST00000183495 199 ntBASIC26.95■■□□□ 1.9
Rbm28Q8CGC6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Rbm28Q8CGC6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Rbm28Q8CGC6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rbm28Q8CGC6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rbm28Q8CGC6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.94■■□□□ 1.9
Rbm28Q8CGC6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rbm28Q8CGC6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.94■■□□□ 1.9
Rbm28Q8CGC6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rbm28Q8CGC6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rbm28Q8CGC6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.92■■□□□ 1.9
Rbm28Q8CGC6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rbm28Q8CGC6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Rbm28Q8CGC6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rbm28Q8CGC6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.91■■□□□ 1.9
Rbm28Q8CGC6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rbm28Q8CGC6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Rbm28Q8CGC6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.9■■□□□ 1.9
Rbm28Q8CGC6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rbm28Q8CGC6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.9■■□□□ 1.9
Rbm28Q8CGC6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Rbm28Q8CGC6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rbm28Q8CGC6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rbm28Q8CGC6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
Rbm28Q8CGC6 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.87■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms