Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.1■■□□□ 1.13
Slc46a2Q8CA03 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Slc46a2Q8CA03 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc46a2Q8CA03 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Slc46a2Q8CA03 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Slc46a2Q8CA03 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc46a2Q8CA03 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc46a2Q8CA03 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.07■■□□□ 1.12
Slc46a2Q8CA03 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Slc46a2Q8CA03 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.07■■□□□ 1.12
Slc46a2Q8CA03 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc46a2Q8CA03 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Slc46a2Q8CA03 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Slc46a2Q8CA03 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Slc46a2Q8CA03 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Slc46a2Q8CA03 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Slc46a2Q8CA03 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.04■■□□□ 1.12
Slc46a2Q8CA03 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Slc46a2Q8CA03 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc46a2Q8CA03 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc46a2Q8CA03 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc46a2Q8CA03 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Slc46a2Q8CA03 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Slc46a2Q8CA03 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Slc46a2Q8CA03 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Slc46a2Q8CA03 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.02■■□□□ 1.12
Slc46a2Q8CA03 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
Slc46a2Q8CA03 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc46a2Q8CA03 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Slc46a2Q8CA03 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Slc46a2Q8CA03 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Slc46a2Q8CA03 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Slc46a2Q8CA03 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Slc46a2Q8CA03 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Gm14121-201ENSMUST00000121441 1380 ntBASIC22■■□□□ 1.11
Slc46a2Q8CA03 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Slc46a2Q8CA03 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Slc46a2Q8CA03 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Gm24970-201ENSMUST00000175582 82 ntBASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Slc46a2Q8CA03 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc46a2Q8CA03 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc46a2Q8CA03 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Slc46a2Q8CA03 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
Slc46a2Q8CA03 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Slc46a2Q8CA03 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Slc46a2Q8CA03 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc46a2Q8CA03 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Slc46a2Q8CA03 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Slc46a2Q8CA03 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc46a2Q8CA03 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Slc46a2Q8CA03 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc46a2Q8CA03 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc46a2Q8CA03 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc46a2Q8CA03 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.92■■□□□ 1.1
Slc46a2Q8CA03 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc46a2Q8CA03 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc46a2Q8CA03 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc46a2Q8CA03 Gm9397-201ENSMUST00000200125 605 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms