Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd9Q8BYH8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd9Q8BYH8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd9Q8BYH8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chd9Q8BYH8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd9Q8BYH8 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.71■□□□□ 0.59
Chd9Q8BYH8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd9Q8BYH8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd9Q8BYH8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd9Q8BYH8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd9Q8BYH8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.7■□□□□ 0.58
Chd9Q8BYH8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd9Q8BYH8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd9Q8BYH8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd9Q8BYH8 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.69■□□□□ 0.58
Chd9Q8BYH8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.69■□□□□ 0.58
Chd9Q8BYH8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd9Q8BYH8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.68■□□□□ 0.58
Chd9Q8BYH8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd9Q8BYH8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.67■□□□□ 0.58
Chd9Q8BYH8 Gm29257-201ENSMUST00000186115 639 ntBASIC18.66■□□□□ 0.58
Chd9Q8BYH8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chd9Q8BYH8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Chd9Q8BYH8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd9Q8BYH8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd9Q8BYH8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.65■□□□□ 0.58
Chd9Q8BYH8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chd9Q8BYH8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chd9Q8BYH8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd9Q8BYH8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chd9Q8BYH8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Chd9Q8BYH8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd9Q8BYH8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd9Q8BYH8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd9Q8BYH8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd9Q8BYH8 Mir3960-201ENSMUST00000198213 73 ntBASIC18.62■□□□□ 0.57
Chd9Q8BYH8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd9Q8BYH8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd9Q8BYH8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd9Q8BYH8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Chd9Q8BYH8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd9Q8BYH8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd9Q8BYH8 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.6■□□□□ 0.57
Chd9Q8BYH8 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.6■□□□□ 0.57
Chd9Q8BYH8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.6■□□□□ 0.57
Chd9Q8BYH8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd9Q8BYH8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd9Q8BYH8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Chd9Q8BYH8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.59■□□□□ 0.57
Chd9Q8BYH8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.59■□□□□ 0.57
Chd9Q8BYH8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Chd9Q8BYH8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd9Q8BYH8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd9Q8BYH8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Chd9Q8BYH8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.58■□□□□ 0.56
Chd9Q8BYH8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Gm13241-201ENSMUST00000094493 780 ntBASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chd9Q8BYH8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd9Q8BYH8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd9Q8BYH8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd9Q8BYH8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd9Q8BYH8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Chd9Q8BYH8 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.55■□□□□ 0.56
Chd9Q8BYH8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.54■□□□□ 0.56
Chd9Q8BYH8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd9Q8BYH8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd9Q8BYH8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd9Q8BYH8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd9Q8BYH8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Chd9Q8BYH8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chd9Q8BYH8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd9Q8BYH8 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.52■□□□□ 0.55
Chd9Q8BYH8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd9Q8BYH8 Gm43566-201ENSMUST00000196851 808 ntBASIC18.51■□□□□ 0.55
Chd9Q8BYH8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd9Q8BYH8 Gm21956-201ENSMUST00000179946 522 ntBASIC18.5■□□□□ 0.55
Chd9Q8BYH8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd9Q8BYH8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chd9Q8BYH8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.5■□□□□ 0.55
Chd9Q8BYH8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms